DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10960 and VBA2

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_009852.3 Gene:VBA2 / 852596 SGDID:S000000497 Length:474 Species:Saccharomyces cerevisiae


Alignment Length:459 Identity:83/459 - (18%)
Similarity:164/459 - (35%) Gaps:127/459 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 SWVGSAMTLGAACVCIPIGFLINMIGRKWTMLFLVLPFILGWTMLIWAVNVSMLYASRFILGIAG 192
            :|:.:|..:.:.......|...:.:||:..:.|....|.:|.....::.|:.||...|.:.||.|
Yeast     5 NWITTAYLITSTSFQPLYGSFSDALGRRNCLFFANGAFTIGCLACGFSKNIYMLSFMRALTGIGG 69

  Fly   193 GAFCVTAPMYTGEIAQKEIRGTLGSFFQLMITIGILFVYAVGAGV--KIFW---------LSIIC 246
            |.....:.:...::.....||...:|..|::..|.:...:.|..:  .|.|         :|:|.
Yeast    70 GGLITLSTIVNSDVIPSSKRGIFQAFQNLLLGFGAICGASFGGTIASSIGWRWCFLIQVPISVIS 134

  Fly   247 GILPLIFGAIFFFMPESPTYLVSKDRSENAIKSIQWLRGKEYDYEPELAELRETDRETKANKVNV 311
            .||      :.:::|....|    :|..::|            ::.....||:.|          
Yeast   135 SIL------MNYYVPNQKEY----NRQNSSI------------FQNPGKILRDID---------- 167

  Fly   312 WAALNRPVTRKALAISMGLMFFQQVCGINAVIFYASRIFLEANTGIEAEWAT-----ILIGIMQV 371
                           .||.:..  :.|:...:.|.|   |..:|. :..|.:     :|:|.:.:
Yeast   168 ---------------VMGSILI--ITGLTLQLLYLS---LGCSTS-KLSWTSPSVLLLLVGSVII 211

  Fly   372 VATFVSTLVVDKLGRRIL----LLASGISMAISTTAIGVYF-----------FLQ--------KQ 413
            :..|:  |...|...|.:    |:.|..|:.:.:.:|.|.|           |.|        |.
Yeast   212 LLLFI--LHERKTSARAIIPMELVNSSYSVVVLSISILVGFASYAYLFTLPLFFQIVLGDSTAKA 274

  Fly   414 DAAQVVSLGWLPVASL----------CLFIIMFSIGYGPVPWLMMGELFATDIKGFAGSLAGTSN 468
            .....:...:.||.||          ||.:::: ||   :..:.:|......|:      ..:.|
Yeast   275 GLRLTIPSLFTPVGSLITGFSMSKYNCLRLLLY-IG---ISLMFLGNFLFLFIE------KTSPN 329

  Fly   469 WLLA-FVVTKTFVNLNDGLGIGGTFWLFAGL-------TVVGVIFVYFAVPETKGKSLNE--IQQ 523
            ||:. |::.   .||..|:....|.:.|..:       |....::::.::....|.:::.  ||.
Yeast   330 WLIGLFLIP---ANLGQGITFPTTLFTFIFMFSKSDQATATSTLYLFRSIGSVWGVAISAGVIQL 391

  Fly   524 ELAG 527
            ..||
Yeast   392 SFAG 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 71/395 (18%)
MFS 118..508 CDD:119392 78/436 (18%)
VBA2NP_009852.3 MFS 1..384 CDD:421695 79/446 (18%)
TRI12 <107..>249 CDD:115279 32/196 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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