DRSC/TRiP Functional Genomics Resources

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Protein Alignment nebu and ITR1

DIOPT Version :10

Sequence 1:NP_648605.1 Gene:nebu / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_010785.1 Gene:ITR1 / 852108 SGDID:S000002905 Length:584 Species:Saccharomyces cerevisiae


Alignment Length:547 Identity:154/547 - (28%)
Similarity:240/547 - (43%) Gaps:58/547 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NSSGEEANKKSGSNNEESSHLLESAENGAKYGSRQPVKIVKASDNGRTSSTPHDQENLLGNMVHT 72
            |:...|.|.:..|.::.....|||.|.     .|.|.    :.|..|....|.:.|:....|:  
Yeast    23 NADSVEFNSEHDSPSKRGKITLESHEI-----QRAPA----SDDEDRIQIKPVNDEDDTSVMI-- 76

  Fly    73 STSNNSQKWPQYVAALAAAGGAFAAGTVLGWTSPAETEIVDRGEGYDFPV----DKDQFSWVGSA 133
             |.|.|...........|:...|..|...|:.|.|   ::..|...|..|    :|:   .|.:|
Yeast    77 -TFNQSLSPFIITLTFVASISGFMFGYDTGYISSA---LISIGTDLDHKVLTYGEKE---IVTAA 134

  Fly   134 MTLGAACVCIPIGFLINMIGRKWTMLFLVLPFILGWTMLIWAVNVSMLYASRFILGIAGGAFCVT 198
            .:|||....|..|...::.|||..::...|.|::|..:.:.|.....:...|.|:|...|...:.
Yeast   135 TSLGALITSIFAGTAADIFGRKRCLMGSNLMFVIGAILQVSAHTFWQMAVGRLIMGFGVGIGSLI 199

  Fly   199 APMYTGEIAQKEIRGTLGSFFQLMITIGILFVYAVGAGVKIF---WLSIICGILPLIFGAIFF-- 258
            ||::..|||.|.|||.|.....|.:|.|.|..|..|||:...   | .|:.| |.||..|:.|  
Yeast   200 APLFISEIAPKMIRGRLTVINSLWLTGGQLVAYGCGAGLNYVNNGW-RILVG-LSLIPTAVQFTC 262

  Fly   259 --FMPESPTYLVSKDRSENAIKSIQWLRGKEYDYEPELAELRETDRETKANKV-------NVWAA 314
              |:|::|.|.|.|.   :..::.:.|:....|...|:.|.:..:..|....:       .||..
Yeast   263 LCFLPDTPRYYVMKG---DLARATEVLKRSYTDTSEEIIERKVEELVTLNQSIPGKNVPEKVWNT 324

  Fly   315 LNR----PVTRKALAISMGLMFFQQVCGINAVIFYASRIFLEANTGIEAEWA-TILIGIMQVVAT 374
            :..    |...:||.|..||...||..|.|::::::..||  ...|.:...| :|::.....:.|
Yeast   325 IKELHTVPSNLRALIIGCGLQAIQQFTGWNSLMYFSGTIF--ETVGFKNSSAVSIIVSGTNFIFT 387

  Fly   375 FVSTLVVDKLGRRILLLAS--GISMAISTTAIGVYFFLQKQDAAQVV-------SLGWLPVASLC 430
            .|:...:||:|||.:||..  |::||:...:|..:|...|.|.|..|       |.|.:.:..:.
Yeast   388 LVAFFSIDKIGRRTILLIGLPGMTMALVVCSIAFHFLGIKFDGAVAVVVSSGFSSWGIVIIVFII 452

  Fly   431 LFIIMFSIGYGPVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGTFWLF 495
            :|...:::|.|.||| ...|||..:::|...|.|..:||..:.|:..||:.:...:...|||..|
Yeast   453 VFAAFYALGIGTVPW-QQSELFPQNVRGIGTSYATATNWAGSLVIASTFLTMLQNITPAGTFAFF 516

  Fly   496 AGLTVVGVIFVYFAVPETKGKSLNEIQ 522
            |||:.:..||.||..||..|..|.|:|
Yeast   517 AGLSCLSTIFCYFCYPELSGLELEEVQ 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebuNP_648605.1 MFS_GLUT6_8_Class3_like 99..520 CDD:340916 131/452 (29%)
ITR1NP_010785.1 MFS_HMIT_like 92..533 CDD:340918 130/454 (29%)

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