DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10960 and VBA3

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_009864.1 Gene:VBA3 / 850290 SGDID:S000000574 Length:458 Species:Saccharomyces cerevisiae


Alignment Length:484 Identity:98/484 - (20%)
Similarity:159/484 - (32%) Gaps:204/484 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 LPFILGWTM-------LIWAVNVSMLYASRFILG-IAGGAF--------C--VTAPM-------- 201
            |.|::|.||       |:.:: :|..:|...|:| |.||||        |  :..|:        
Yeast    21 LCFVIGCTMVGERSRPLVISI-LSCAFAVAAIVGPIIGGAFTTHVTWRWCFYINLPIGGLAIIMF 84

  Fly   202 ---YTGE---IAQ--KEIRGTLGSF----FQLMITI-----GILFVY------AVGAGVKIF--- 240
               |..|   |.|  |:..||:.||    |:..:..     ||:|.:      ...||:.:|   
Yeast    85 LLTYKAENKGILQQIKDAIGTISSFTFSKFRHQVNFKRLMNGIIFKFDFFGFALCSAGLVLFLLG 149

  Fly   241 ---------WLS------IICGILPLIFGAIFFFMPESPTYLVSKDRSENAIKSIQWLRGKEYDY 290
                     |.|      ::.|:|..||..::.|      :|..|                 ::.
Yeast   150 LTFGGNKYSWNSGQVIAYLVLGVLLFIFSLVYDF------FLFDK-----------------FNP 191

  Fly   291 EPELAELRETDRETKANKVNVWAALNRPVTRKALAISMGLMFFQQVCGINAVIFYASRIF--LEA 353
            ||:....|.             ..|.|.|.:.|:.| :.::.|....|.|..:.|:.:.|  :.|
Yeast   192 EPDNISYRP-------------LLLRRLVAKPAIII-INMVTFLLCTGYNGQMIYSVQFFQLIFA 242

  Fly   354 NTGIEAEWATILIGIMQVVATFVSTLVVDKLGR-RILLLASGI-------------SMAISTTAI 404
            ::..:|....|.|.|..|:|...|.::..|||. :.||:..|:             :.:..:|.|
Yeast   243 SSAWKAGLHLIPIVITNVIAAIASGVITKKLGLVKPLLIFGGVLGVIGAGLMTLMTNTSTKSTQI 307

  Fly   405 GVYFFLQKQDAAQVVSLGWLPVASLCLFIIMFSIGYGPVPWLMMGEL------------------ 451
            ||                        |.:..||:|:.....||..:|                  
Yeast   308 GV------------------------LLLPGFSLGFALQASLMSAQLQITKDRPEAAMDFIEVTA 348

  Fly   452 FATDIKGFAGSLAGTSNWLLAFVVTKTFVN----------------------------------- 481
            |.|.:|....:|.|.   |...|.:.:|.|                                   
Yeast   349 FNTFMKSLGTTLGGV---LSTTVFSASFHNKVSRAHLEPYEGKTVDDMILYRLQNYDGSHSTIGN 410

  Fly   482 -LNDGLGIGGTFWLFAGLTVVGVIFVYFA 509
             |:|  .|...||:..|...:|.:|..|:
Yeast   411 ILSD--SIKNVFWMDLGFYALGFLFCSFS 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 86/411 (21%)
MFS 118..508 CDD:119392 97/481 (20%)
VBA3NP_009864.1 MFS <1..369 CDD:421695 86/412 (21%)
MFS <1..>181 CDD:421695 39/160 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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