DRSC/TRiP Functional Genomics Resources

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Protein Alignment nebu and SGB1

DIOPT Version :10

Sequence 1:NP_648605.1 Gene:nebu / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_178100.3 Gene:SGB1 / 844321 AraportID:AT1G79820 Length:495 Species:Arabidopsis thaliana


Alignment Length:418 Identity:120/418 - (28%)
Similarity:200/418 - (47%) Gaps:53/418 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 SWVGSAMTLGAACVCIPIGFLINMIGRKWTMLFLVLPFILGWTMLIWAVNVSMLYASRFILGIAG 192
            :::||..:          |.:.:.:||:.......||.|:|.::.....::..:...||::||..
plant   106 AFIGSLFS----------GLVADGVGRRRAFQLSALPMIVGASVSASTESLMGMLLGRFLVGIGM 160

  Fly   193 GAFCVTAPMYTGEIAQKEIRGTLGSFFQLMITIGILFVYAVGAGVK--------IFWLSIICGIL 249
            |.......:|..|::...:|||.||..|:...||:|.....|...|        .||:|.:    
plant   161 GIGPSVTALYVTEVSPAYVRGTYGSSTQIATCIGLLGSLFAGIPAKDNLGWWRICFWISTV---- 221

  Fly   250 PLIFGAIFF-FMPESPTYLVSKDRSENAIKSIQWLRGKEYDYEPELAELRETDRETKANKVNVWA 313
            |....|:|. ...|||.:|..:.|:..|....:.|.|..| .:..:|||.::||...|:...:..
plant   222 PAAMLAVFMELCVESPQWLFKRGRAAEAEAVFEKLLGGSY-VKAAMAELVKSDRGDDADSAKLSE 285

  Fly   314 ALNRPVTRKALAISMGLMFF--QQVCGINAVIFYASRIFLEANTGIEAEWATILIGIMQVVATFV 376
            .|   ..|....:.:|...|  ||:.|||||.:::|.:|.:|  |:.:..|.|.:|:..::.:.|
plant   286 LL---FGRSFRVVFIGSTLFALQQLSGINAVFYFSSTVFKKA--GVPSASANICVGVCNLLGSTV 345

  Fly   377 STLVVDKLGRRILLLASGISMAISTTAIGVYFFLQKQDAAQVVSLG------WLPVASLCLFIIM 435
            :.:::|||||::||:.|...||:|   :|:       .|....||.      :|.|..:.||::.
plant   346 AVVLMDKLGRKVLLIGSFAGMAVS---LGL-------QAIAYTSLPSPFGTLFLSVGGMLLFVLS 400

  Fly   436 FSIGYGPVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLG---IGGTFWLFAG 497
            |:.|.||||.|::.|:....::..|.::....:|::.|.|...|:.:.:.||   :...|..|. 
plant   401 FATGAGPVPSLLLSEICPGRLRATALAVCLAVHWVINFFVGLLFLRMLEQLGSVLLNAIFGFFC- 464

  Fly   498 LTVVGVIFVYFAVPETKGKSLNEIQQEL 525
              ||.||||...|.|||||||.||:..|
plant   465 --VVAVIFVQKNVVETKGKSLQEIEISL 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebuNP_648605.1 MFS_GLUT6_8_Class3_like 99..520 CDD:340916 117/411 (28%)
SGB1NP_178100.3 MFS_GLUT_like 60..477 CDD:340873 110/403 (27%)

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