DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nebu and AT1G54730

DIOPT Version :10

Sequence 1:NP_648605.1 Gene:nebu / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_850964.1 Gene:AT1G54730 / 841914 AraportID:AT1G54730 Length:470 Species:Arabidopsis thaliana


Alignment Length:451 Identity:148/451 - (32%)
Similarity:243/451 - (53%) Gaps:29/451 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 VAALAAAGGAFAAGTVLGWTSPAETEIVDRGEGYDFPVDKDQFSWVGSAMTLGAACVCIPIGFLI 149
            :....|..|:|..|:.:|::||.::::..     :..:...::|..||.:|:||.......|.:.
plant    34 LTTFVAVSGSFVFGSAIGYSSPVQSDLTK-----ELNLSVAEYSLFGSILTIGAMIGAAMSGRIA 93

  Fly   150 NMIGRKWTMLFLVLPFILGWTMLIWAVNVSMLYASRFILGIAGGAFCVTAPMYTGEIAQKEIRGT 214
            :||||:.||.|..:..||||..:..:.....|...||::|...|.|....|:|..||..|.:||.
plant    94 DMIGRRATMGFSEMFCILGWLAIYLSKVAIWLDVGRFLVGYGMGVFSFVVPVYIAEITPKGLRGG 158

  Fly   215 LGSFFQLMITIGILFVYAVGAGVKIFWLSIICGILPLIFGAI-FFFMPESPTYLVSKDRSENAIK 278
            ..:..||:|.:|:...|.:|:.:....|::| |::|.:...: .|.:||||.:|....:.|....
plant   159 FTTVHQLLICLGVSVTYLLGSFIGWRILALI-GMIPCVVQMMGLFVIPESPRWLAKVGKWEEFEI 222

  Fly   279 SIQWLRGKEYDYEPELAELRE-TDRETKANKVNVWAALNRPVTRKALAISMGLMFFQQVCGINAV 342
            ::|.|||:..|...|..|::: |.|.|..::.:: ..|.:|...|:|.:.:|||..||..|:|.:
plant   223 ALQRLRGESADISYESNEIKDYTRRLTDLSEGSI-VDLFQPQYAKSLVVGVGLMVLQQFGGVNGI 286

  Fly   343 IFYASRIFLEANTGIEAEWATILIGIMQVVATFVSTLVVDKLGRRILLLASGISMAISTTAIGVY 407
            .||||.||..|  |:.::...|.:.::|:..|.:..|::||.|||.|||.|.....|....:|:.
plant   287 AFYASSIFESA--GVSSKIGMIAMVVVQIPMTTLGVLLMDKSGRRPLLLISATGTCIGCFLVGLS 349

  Fly   408 FFLQ--KQ---DAAQVVSLGWLPVASLCLFIIMFSIGYGPVPWLMMGELFATDIKGFAGSLAGTS 467
            |.||  ||   ||:      :|.:..:.::...||:|.|.:||::|.|:|..||||.||||....
plant   350 FSLQFVKQLSGDAS------YLALTGVLVYTGSFSLGMGGIPWVIMSEIFPIDIKGSAGSLVTVV 408

  Fly   468 NWLLAFVVTKTF---VNLNDGLGIGGTFWLFAGLTVVGVIFVYFAVPETKGKSLNEIQQEL 525
            :|:.:::::.||   :|.|.    .|||::||.:....||||...||||||::|.|||..:
plant   409 SWVGSWIISFTFNFLMNWNP----AGTFYVFATVCGATVIFVAKLVPETKGRTLEEIQYSI 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebuNP_648605.1 MFS_GLUT6_8_Class3_like 99..520 CDD:340916 141/430 (33%)
AT1G54730NP_850964.1 MFS_GLUT6_8_Class3_like 37..460 CDD:340916 145/441 (33%)

Return to query results.
Submit another query.