DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10960 and TMT2

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001190923.1 Gene:TMT2 / 829684 AraportID:AT4G35300 Length:739 Species:Arabidopsis thaliana


Alignment Length:750 Identity:137/750 - (18%)
Similarity:225/750 - (30%) Gaps:323/750 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 VAALAAAGG--------AFAAGTVLGWTSPAETEIVDRGEGYDFPVDKDQFSWVGSAMTLGAACV 141
            :.|:|||.|        |..||.||........|.....||.           :.:...:||..:
plant     6 LVAIAAAVGNLLQGWDNATIAGAVLYIKKEFNLESNPSVEGL-----------IVAMSLIGATLI 59

  Fly   142 CIPIGFLINMIGRKWTMLFLVLPFILGWTMLIWAVNVSMLYASRFILGIAGGAFCVTAPMYTGEI 206
            ....|.:.:.:||:..::...:.:.:|..:::|:.||.:|...|.:.|...|......|:|..|.
plant    60 TTCSGGVADWLGRRPMLILSSILYFVGSLVMLWSPNVYVLLLGRLLDGFGVGLVVTLVPIYISET 124

  Fly   207 AQKEIRGTLGSFFQLMITIGILFVYAVGAGVKIF----WLSIICGIL--P--LIFGAIFFFMPES 263
            |..||||.|.:..|...:.|:...|.:..|:.:.    | .::.|:|  |  :.|....||:|||
plant   125 APPEIRGLLNTLPQFTGSGGMFLSYCMVFGMSLMPSPSW-RLMLGVLFIPSLVFFFLTVFFLPES 188

  Fly   264 PTYLVSKDRSENAIKSIQWLRGKEYDYEPELAELRE----------------------------- 299
            |.:||||.|...|.:.:|.|||:| |...|:|.|.|                             
plant   189 PRWLVSKGRMLEAKRVLQRLRGRE-DVSGEMALLVEGLGIGGETTIEEYIIGPADEVTDDHDIAV 252

  Fly   300 ----------------------------------------------------------------- 299
                                                                             
plant   253 DKDQIKLYGAEEGLSWVARPVKGGSTMSVLSRHGSTMSRRQGSLIDPLVTLFGSVHEKMPDTGSM 317

  Fly   300 ----------------------------------------------------------------- 299
                                                                             
plant   318 RSALFPHFGSMFSVGGNQPRHEDWDEENLVGEGEDYPSDHGDDSEDDLHSPLISRQTTSMEKDMP 382

  Fly   300 ---------------------------------------TDRE---------------------- 303
                                                   |:||                      
plant   383 HTAHGTLSTFRHGSQVQGAQGEGAGSMGIGGGWQVAWKWTEREDESGQKEGGFKRIYLHQEGFPG 447

  Fly   304 --------------------------------------------------TKANKVNVWAALNRP 318
                                                              ::..|.::|..|:.|
plant   448 SRRGSIVSLPGGDGTGEADFVQASALVSQPALYSKDLLKEHTIGPAMVHPSETTKGSIWHDLHDP 512

  Fly   319 VTRKALAISMGLMFFQQVCGINAVIFYASRIFLEA-------NTGIEAEWATILIG----IMQVV 372
            ..::||.:.:||...||..|||.|::|..:|..:|       |.||.:..|::||.    .:.:.
plant   513 GVKRALVVGVGLQILQQFSGINGVLYYTPQILEQAGVGILLSNMGISSSSASLLISALTTFVMLP 577

  Fly   373 ATFVSTLVVDKLGRRILLLASGISMAISTTAIGVYFFLQKQDAAQVVSLGWLPVASLCLFIIMFS 437
            |..|:..::|..|||.|||.:...:..|...:.:...:........|    |...|:.|:...|.
plant   578 AIAVAMRLMDLSGRRTLLLTTIPILIASLLVLVISNLVHMNSIVHAV----LSTVSVVLYFCFFV 638

  Fly   438 IGYGPVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGTFWLFAGLTVVG 502
            :|:||.|.::..|:|.|.::|...::...:.|:...:||.:...|...:|:.|.|.::|.:..:.
plant   639 MGFGPAPNILCSEIFPTRVRGICIAICALTFWICDIIVTYSLPVLLKSIGLAGVFGMYAIVCCIS 703

  Fly   503 VIFVYFAVPETKGKSLNEI---------QQELAGN 528
            .:||:..||||||..|..|         |.|.|.|
plant   704 WVFVFIKVPETKGMPLEVITEFFSVGARQAEAAKN 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 104/645 (16%)
MFS 118..508 CDD:119392 112/678 (17%)
TMT2NP_001190923.1 MFS 14..>174 CDD:421695 38/171 (22%)
MFS <516..713 CDD:421695 53/200 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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