DRSC/TRiP Functional Genomics Resources

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Protein Alignment nebu and INT4

DIOPT Version :10

Sequence 1:NP_648605.1 Gene:nebu / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_193381.1 Gene:INT4 / 827346 AraportID:AT4G16480 Length:582 Species:Arabidopsis thaliana


Alignment Length:548 Identity:133/548 - (24%)
Similarity:234/548 - (42%) Gaps:119/548 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 YVAALAAAGGAFAAGTVLGWTSPAETEIVDRG-----EGYDFPVDKDQFSWVGS---AMTLGAAC 140
            |:..||.:.|  ..|.:.|:    :|.::...     |.:|   :.|:.:|:.|   :|.:..|.
plant    26 YIMRLALSAG--IGGLLFGY----DTGVISGALLFIKEDFD---EVDKKTWLQSTIVSMAVAGAI 81

  Fly   141 VCIPIGFLIN-MIGRKWTMLFLVLPFILGWTMLIWAVNVSMLYASRFILGIAGGAFCVTAPMYTG 204
            |...:|..|| ..||:.::|...:.|::|..::.:|....::...|..:|...|...:|:|:|..
plant    82 VGAAVGGWINDKFGRRMSILIADVLFLIGAIVMAFAPAPWVIIVGRIFVGFGVGMASMTSPLYIS 146

  Fly   205 EIAQKEIRGTLGSFFQLMITIGILFVYAVGAGVKIF--------WLSIICGILPLIFGAIFFFMP 261
            |.:...|||.|.|...|:||.|..|.|.:...   |        |:..:.|:..::...:...:|
plant   147 EASPARIRGALVSTNGLLITGGQFFSYLINLA---FVHTPGTWRWMLGVAGVPAIVQFVLMLSLP 208

  Fly   262 ESPTYLVSKDRSENAIKSIQWLRGKEYDYEPELAELRETDRETKANK--------VNVWAALNRP 318
            |||.:|..|||...:...::.:...: :.|.|:..|:.:....||::        ..:..|...|
plant   209 ESPRWLYRKDRIAESRAILERIYPAD-EVEAEMEALKLSVEAEKADEAIIGDSFSAKLKGAFGNP 272

  Fly   319 VTRKALAISMGLMFFQQVCGINAVIFYASRI--FLEANTGIEAEWATILIGIMQVVATFVSTLVV 381
            |.|:.||..:.:...||..|||.|::|:..|  |....:...|...:::...:..:.:.||.:.|
plant   273 VVRRGLAAGITVQVAQQFVGINTVMYYSPSIVQFAGYASNKTAMALSLITSGLNALGSIVSMMFV 337

  Fly   382 DKLGRRILLLAS--GI-------SMAISTTAI-------------------GVYFFLQKQDA--- 415
            |:.|||.|::.|  ||       :...|..||                   ..|..|..::|   
plant   338 DRYGRRKLMIISMFGIIACLIILATVFSQAAIHAPKIDAFESRTFAPNATCSAYAPLAAENAPPS 402

  Fly   416 -------------------------AQVV-----------------------SLGWLPVASLCLF 432
                                     |.||                       ..|:|.:..|.|:
plant   403 RWNCMKCLRSECGFCASGVQPYAPGACVVLSDDMKATCSSRGRTFFKDGCPSKFGFLAIVFLGLY 467

  Fly   433 IIMFSIGYGPVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGTFWLFAG 497
            |::::.|.|.|||::..|::....:|..|.:|..|||:...:|:::|::|...||..|||.||||
plant   468 IVVYAPGMGTVPWIVNSEIYPLRYRGLGGGIAAVSNWVSNLIVSESFLSLTHALGSSGTFLLFAG 532

  Fly   498 LTVVGVIFVYFAVPETKGKSLNEIQQEL 525
            .:.:|:.|::..||||||....|:::.|
plant   533 FSTIGLFFIWLLVPETKGLQFEEVEKLL 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebuNP_648605.1 MFS_GLUT6_8_Class3_like 99..520 CDD:340916 126/526 (24%)
INT4NP_193381.1 MFS_HMIT_like 33..547 CDD:340918 123/526 (23%)

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