DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10960 and TMT3

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001190054.1 Gene:TMT3 / 824312 AraportID:AT3G51490 Length:737 Species:Arabidopsis thaliana


Alignment Length:732 Identity:143/732 - (19%)
Similarity:237/732 - (32%) Gaps:312/732 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 VAALAAAGGAFAAGTVLGWTSP--AETEIVDRGEGYDFPVDKD-QFSWVGSAMTL-GAACVCIPI 145
            :.|||||.|    ..:.||.:.  |...|..:.|   |.::|: :...:..||:| ||..:....
plant     6 LVALAAAIG----NMLQGWDNATIAGAVIYIKKE---FHLEKEPKIEGLIVAMSLIGATLITTFS 63

  Fly   146 GFLINMIGRKWTMLFLVLPFILGWTMLIWAVNVSMLYASRFILGIAGGAFCVTAPMYTGEIAQKE 210
            |.:.:.:||:..::...:.:.|...::.|:.||.:|..:|.:.|...|......|:|..|.|..|
plant    64 GPVSDKVGRRSMLILSSVLYFLSSIVMFWSPNVYVLLFARLLDGFGIGLAVTLVPIYISETAPSE 128

  Fly   211 IRGTLGSFFQLMITIGILFVYAVGAGVKI----FWLSIICGILPLIFGAIF----FFMPESPTYL 267
            |||.|.:|.|...:.|:...|.:..|:.:    .| .::.|:|.:...|.|    ||:||||.:|
plant   129 IRGLLNTFPQFCGSGGMFLSYCLVFGMSLQESPSW-RLMLGVLSIPSIAYFVLAAFFLPESPRWL 192

  Fly   268 VSKDRSENAIKSIQWLRGK---------------------------------------------- 286
            |||.|.:.|.:.:|.|||:                                              
plant   193 VSKGRMDEARQVLQRLRGREDVSGELALLVEGLGVGKDTSIEEYVIGPDNEENEGGNELPRKDQI 257

  Fly   287 ----------------------------------------------------------------- 286
                                                                             
plant   258 KLYGPEDGQSWMAKPVKGQSSLALASRQGSMLPRGGSLMDPLVTLFGSIHENLPSENMNASSRSM 322

  Fly   287 ---------------EYDYEPE------------------------------------------- 293
                           |..::||                                           
plant   323 LFPNMGSILGMMGRQESQWDPERNNEDSSDQDENLNSPLLSPQTTEPDDYHQRTVGTMHRRQSSL 387

  Fly   294 -LAELRET------------------------------------DRETKANKVN----------- 310
             :|.:.||                                    ..||..|..|           
plant   388 FMANVGETATATSIGGGWQLAWKYNDKVGADGKRVNGGLQRMYIHEETANNNTNNIPFSRRGSLL 452

  Fly   311 ----------------------------------------------VWAALNRPVTRKALAISMG 329
                                                          .|..|..|..::||.:.:|
plant   453 SFHPEGDGHDQVNGYVQAAALVSQASMMPGGKGETAMLPKEVKDGPGWRELKEPGVKRALMVGVG 517

  Fly   330 LMFFQQVCGINAVIFYASRIFLE-------ANTGIEAEWATILIG----IMQVVATFVSTLVVDK 383
            |...||..|||.|::|..:|..|       .|.||.||.|::||.    ::.:....||..::|.
plant   518 LQILQQFAGINGVMYYTPQILEETGVSSLLTNLGISAESASLLISALTTLLMLPCILVSMRLMDV 582

  Fly   384 LGRRILLLAS--GISMAISTTAIGVYFFLQKQDAAQVVSLG-----WLPVASLCLFIIMFSIGYG 441
            .|||.|:|::  .:.:::.|..||           .:|:||     .:..||:.:::..|.:|:|
plant   583 TGRRSLMLSTIPILILSLVTLVIG-----------SLVNLGGSINALISTASVTVYLSCFVMGFG 636

  Fly   442 PVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGTFWLFAGLTVVGVIFV 506
            .:|.::..|:|.|.::|...::...:.|:...:||.|...:...:||.|.|.::|.:..|..:||
plant   637 AIPNILCSEIFPTSVRGLCITICALTFWICDIIVTYTLPVMLKSIGIAGVFGIYAIVCAVAWVFV 701

  Fly   507 YFAVPETKGKSLNEIQQ 523
            |..||||||..|..|.:
plant   702 YLKVPETKGMPLEVISE 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 112/647 (17%)
MFS 118..508 CDD:119392 123/680 (18%)
TMT3NP_001190054.1 MFS 9..>186 CDD:119392 49/184 (27%)
MFS <512..703 CDD:119392 56/201 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.