DRSC/TRiP Functional Genomics Resources

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Protein Alignment nebu and TMT3

DIOPT Version :10

Sequence 1:NP_648605.1 Gene:nebu / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001190054.1 Gene:TMT3 / 824312 AraportID:AT3G51490 Length:737 Species:Arabidopsis thaliana


Alignment Length:732 Identity:143/732 - (19%)
Similarity:237/732 - (32%) Gaps:312/732 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 VAALAAAGGAFAAGTVLGWTSP--AETEIVDRGEGYDFPVDKD-QFSWVGSAMTL-GAACVCIPI 145
            :.|||||.|    ..:.||.:.  |...|..:.|   |.::|: :...:..||:| ||..:....
plant     6 LVALAAAIG----NMLQGWDNATIAGAVIYIKKE---FHLEKEPKIEGLIVAMSLIGATLITTFS 63

  Fly   146 GFLINMIGRKWTMLFLVLPFILGWTMLIWAVNVSMLYASRFILGIAGGAFCVTAPMYTGEIAQKE 210
            |.:.:.:||:..::...:.:.|...::.|:.||.:|..:|.:.|...|......|:|..|.|..|
plant    64 GPVSDKVGRRSMLILSSVLYFLSSIVMFWSPNVYVLLFARLLDGFGIGLAVTLVPIYISETAPSE 128

  Fly   211 IRGTLGSFFQLMITIGILFVYAVGAGVKI----FWLSIICGILPLIFGAIF----FFMPESPTYL 267
            |||.|.:|.|...:.|:...|.:..|:.:    .| .::.|:|.:...|.|    ||:||||.:|
plant   129 IRGLLNTFPQFCGSGGMFLSYCLVFGMSLQESPSW-RLMLGVLSIPSIAYFVLAAFFLPESPRWL 192

  Fly   268 VSKDRSENAIKSIQWLRGK---------------------------------------------- 286
            |||.|.:.|.:.:|.|||:                                              
plant   193 VSKGRMDEARQVLQRLRGREDVSGELALLVEGLGVGKDTSIEEYVIGPDNEENEGGNELPRKDQI 257

  Fly   287 ----------------------------------------------------------------- 286
                                                                             
plant   258 KLYGPEDGQSWMAKPVKGQSSLALASRQGSMLPRGGSLMDPLVTLFGSIHENLPSENMNASSRSM 322

  Fly   287 ---------------EYDYEPE------------------------------------------- 293
                           |..::||                                           
plant   323 LFPNMGSILGMMGRQESQWDPERNNEDSSDQDENLNSPLLSPQTTEPDDYHQRTVGTMHRRQSSL 387

  Fly   294 -LAELRET------------------------------------DRETKANKVN----------- 310
             :|.:.||                                    ..||..|..|           
plant   388 FMANVGETATATSIGGGWQLAWKYNDKVGADGKRVNGGLQRMYIHEETANNNTNNIPFSRRGSLL 452

  Fly   311 ----------------------------------------------VWAALNRPVTRKALAISMG 329
                                                          .|..|..|..::||.:.:|
plant   453 SFHPEGDGHDQVNGYVQAAALVSQASMMPGGKGETAMLPKEVKDGPGWRELKEPGVKRALMVGVG 517

  Fly   330 LMFFQQVCGINAVIFYASRIFLE-------ANTGIEAEWATILIG----IMQVVATFVSTLVVDK 383
            |...||..|||.|::|..:|..|       .|.||.||.|::||.    ::.:....||..::|.
plant   518 LQILQQFAGINGVMYYTPQILEETGVSSLLTNLGISAESASLLISALTTLLMLPCILVSMRLMDV 582

  Fly   384 LGRRILLLAS--GISMAISTTAIGVYFFLQKQDAAQVVSLG-----WLPVASLCLFIIMFSIGYG 441
            .|||.|:|::  .:.:::.|..||           .:|:||     .:..||:.:::..|.:|:|
plant   583 TGRRSLMLSTIPILILSLVTLVIG-----------SLVNLGGSINALISTASVTVYLSCFVMGFG 636

  Fly   442 PVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGTFWLFAGLTVVGVIFV 506
            .:|.::..|:|.|.::|...::...:.|:...:||.|...:...:||.|.|.::|.:..|..:||
plant   637 AIPNILCSEIFPTSVRGLCITICALTFWICDIIVTYTLPVMLKSIGIAGVFGIYAIVCAVAWVFV 701

  Fly   507 YFAVPETKGKSLNEIQQ 523
            |..||||||..|..|.:
plant   702 YLKVPETKGMPLEVISE 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebuNP_648605.1 MFS_GLUT6_8_Class3_like 99..520 CDD:340916 136/713 (19%)
TMT3NP_001190054.1 MFS 10..>193 CDD:475125 52/190 (27%)
MFS <510..707 CDD:475125 59/207 (29%)

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