DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10960 and AT3G20460

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_188681.1 Gene:AT3G20460 / 821591 AraportID:AT3G20460 Length:488 Species:Arabidopsis thaliana


Alignment Length:442 Identity:132/442 - (29%)
Similarity:227/442 - (51%) Gaps:33/442 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 GAFAAGTVLGWTSPAETEIVDRGEGYDFPVDKDQFSWVGSAMTLGAACVCIPIGFLINMIGRKWT 157
            |.|:.||..|:||||:|.|:   .|.:..:  .:||:.|:.:|:|........|.|.::.||:..
plant    63 GTFSYGTAAGFTSPAQTGIM---AGLNLSL--AEFSFFGAVLTIGGLVGAAMSGKLADVFGRRGA 122

  Fly   158 MLFLVLPFILGWTMLIWAVNVSMLYASRFILGIAGGAFCVTAPMYTGEIAQKEIRGTLGSFFQLM 222
            :.......:.||.|:.::.....|...|..||:|.|......|:|..|||.|::|||..:...|:
plant   123 LGVSNSFCMAGWLMIAFSQATWSLDIGRLFLGVAAGVASYVVPVYIVEIAPKKVRGTFSAINSLV 187

  Fly   223 ITIGILFVYAVGAGVKIFWLSIICGILPLIFGAI-FFFMPESPTYLVSKDRSENAIKSIQWLRGK 286
            :...:...|.:|:.:....|::| ..:|.:|..: .||:||||.:|....|.:.:..|:|.|||.
plant   188 MCASVAVTYLLGSVISWQKLALI-STVPCVFEFVGLFFIPESPRWLSRNGRVKESEVSLQRLRGN 251

  Fly   287 EYDYEPELAELRETDRETKANKVNVWAALNRPVTRKALAISMGLMFFQQVCGINAVIFYASRIFL 351
            ..|...|.||:::.....:..|.:.:..|..|...:.:.:.:||:..||:.|::...||.|.||.
plant   252 NTDITKEAAEIKKYMDNLQEFKEDGFFDLFNPRYSRVVTVGIGLLVLQQLGGLSGYTFYLSSIFK 316

  Fly   352 EA----NTGIEAEWATILIGIMQVVATFVSTLVVDKLGRRILLLASGISMAISTTAIGVYFFLQK 412
            ::    |.|:      ::..::|.|.:.:..::|||.|||.||..:.|.|.:.:...|:.|..| 
plant   317 KSGFPNNVGV------MMASVVQSVTSVLGIVIVDKYGRRSLLTVATIMMCLGSLITGLSFLFQ- 374

  Fly   413 QDAAQVVSLGWL----PVAS---LCLFIIMFSIGYGPVPWLMMGELFATDIKGFAGSLAGTSNWL 470
                   |.|.|    |:::   :.:|:...:||.|.:||:|:.|:...:|||.||:|...::|.
plant   375 -------SYGLLEHYTPISTFMGVLVFLTSITIGIGGIPWVMISEMTPINIKGSAGTLCNLTSWS 432

  Fly   471 LAFVVTKTFVNLNDGLGIGGTFWLFAGLTVVGVIFVYFAVPETKGKSLNEIQ 522
            ..:.|:.|| |........|.|:::..::.||::||...||||:|:||.|||
plant   433 SNWFVSYTF-NFLFQWSSSGVFFIYTMISGVGILFVMKMVPETRGRSLEEIQ 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 101/368 (27%)
MFS 118..508 CDD:119392 110/401 (27%)
AT3G20460NP_188681.1 MFS_GLUT6_8_Class3_like 54..481 CDD:340916 129/438 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000275
OrthoInspector 1 1.000 - - mtm972
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.910

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