DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10960 and AT3G19940

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_188628.1 Gene:AT3G19940 / 821532 AraportID:AT3G19940 Length:514 Species:Arabidopsis thaliana


Alignment Length:413 Identity:118/413 - (28%)
Similarity:205/413 - (49%) Gaps:21/413 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 DKDQFSWVGSAMTLGAACVCIPIGFLINMIGRKWTMLFLVLPFILGWTMLIWAVNVSMLYASRFI 187
            |........|::.|.|.........:....|||.:|....|.|::|.....:|||||||...|.:
plant    80 DNQMLQLFTSSLYLAALVASFMASVITRKHGRKVSMFIGGLAFLIGALFNAFAVNVSMLIIGRLL 144

  Fly   188 LGIAGGAFCVTAPMYTGEIAQKEIRGTLGSFFQLMITIGILFVYAVGAGVKIF----W-LSIICG 247
            ||:..|....:.|:|..|:|..:|||.|...||:.||||||....:..|....    | :|:...
plant   145 LGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILVANLINYGTSKMAQHGWRVSLGLA 209

  Fly   248 ILP---LIFGAIFFFMPESPTYLVSKDRSENAIKSIQWLRGKEYDYEPELAELRETDRETKANKV 309
            .:|   ::.|:  |.:|::|..::.:.::|.|.:.::.:||.: :.:.|..:|  .|....|.||
plant   210 AVPAVVMVIGS--FILPDTPNSMLERGKNEEAKQMLKKIRGAD-NVDHEFQDL--IDAVEAAKKV 269

  Fly   310 -NVWAALNRPVTRKALAISMGLMFFQQVCGINAVIFYASRIFLEANTGIEAE-WATILIGIMQVV 372
             |.|..:.....|.||.....:.||||:.|||.::|||..:|.....|.:|. .:.::.|::.::
plant   270 ENPWKNIMESKYRPALIFCSAIPFFQQITGINVIMFYAPVLFKTLGFGDDAALMSAVITGVVNML 334

  Fly   373 ATFVSTLVVDKLGRRILLLASGISMAISTTAIGVY----FFLQKQDAAQVVSLGWLPVASLCLFI 433
            :||||...||:.|||:|.|..||.|.|....:|.:    |...........:..|: :|.:|:::
plant   335 STFVSIYAVDRYGRRLLFLEGGIQMFICQLLVGSFIGARFGTSGTGTLTPATADWI-LAFICVYV 398

  Fly   434 IMFSIGYGPVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGTFWLFAGL 498
            ..|:..:||:.||:..|:...:|:....::..:.|....|::.:.|:.:...:.. |.|:.||.:
plant   399 AGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTMLCHMKF-GLFYFFASM 462

  Fly   499 TVVGVIFVYFAVPETKGKSLNEI 521
            ..:..:|:||.:|||||..:.|:
plant   463 VAIMTVFIYFLLPETKGVPIEEM 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 103/364 (28%)
MFS 118..508 CDD:119392 110/398 (28%)
AT3G19940NP_188628.1 Sugar_tr 29..489 CDD:278511 118/413 (29%)
MFS 79..475 CDD:119392 112/401 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.720

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