DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10960 and PMT5

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_188513.1 Gene:PMT5 / 821416 AraportID:AT3G18830 Length:539 Species:Arabidopsis thaliana


Alignment Length:528 Identity:136/528 - (25%)
Similarity:248/528 - (46%) Gaps:57/528 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 ASDNGRTSSTP----HDQENLLGNMVHTSTSNNSQKWPQYVAALAAAGGAFAAGTVLGWTSPAET 109
            |:...||:.:|    |..|::|  .......||.    .:..|:.|:..:...|..:|..|.|..
plant     4 ATPENRTAPSPPPVKHVPESVL--PAKPPKRNNY----AFACAILASMTSILLGYDIGVMSGAMI 62

  Fly   110 EIVDRGEGYDFPVDKDQFSWVGSAMTLGAACVCIPIGFLINMIGRKWTMLFLVLPFILGWTMLIW 174
            .|     ..|..::..|...:..::.:.:.......|...:.|||::|::.....|..|..::..
plant    63 YI-----KRDLKINDLQIGILAGSLNIYSLIGSCAAGRTSDWIGRRYTIVLAGAIFFAGAILMGL 122

  Fly   175 AVNVSMLYASRFILGIAGGAFCVTAPMYTGEIAQKEIRGTLGSFFQLMITIGILFVYAVGAG--- 236
            :.|.:.|...|||.||..|...:.||:||.|::....||.|.||.::.|..||:..|.....   
plant   123 SPNYAFLMFGRFIAGIGVGYALMIAPVYTAEVSPASSRGFLNSFPEVFINAGIMLGYVSNLAFSN 187

  Fly   237 --VKIFW-LSIICGILPLIFGAI-FFFMPESPTYLVSKDRSENA-----------------IKSI 280
              :|:.| |.:..|.:|.:..|| ...|||||.:||.:.|..:|                 ::.|
plant   188 LPLKVGWRLMLGIGAVPSVILAIGVLAMPESPRWLVMQGRLGDAKRVLDKTSDSPTEATLRLEDI 252

  Fly   281 QWLRGKEYDYEPELAELRETDRETKANKVNVWAAL---NRPVTRKALAISMGLMFFQQVCGINAV 342
            :...|...|...::.::...:    ::...||..|   ..|..|:.:..::|:.||||..||:||
plant   253 KHAAGIPADCHDDVVQVSRRN----SHGEGVWRELLIRPTPAVRRVMIAAIGIHFFQQASGIDAV 313

  Fly   343 IFYASRIFLEANTGIEAE----WATILIGIMQVVATFVSTLVVDKLGRRILLLASGISMAISTTA 403
            :.::.|||..|  |::.:    .||:.:|:::.....|:|.::|::|||.|||.|...|.:|..|
plant   314 VLFSPRIFKTA--GLKTDHQQLLATVAVGVVKTSFILVATFLLDRIGRRPLLLTSVGGMVLSLAA 376

  Fly   404 IGVYFFLQKQDAAQVVSLGWLPVASLCLFIIMFSIGYGPVPWLMMGELFATDIKGFAGSLAGTSN 468
            :|....:..|...:|:....:.:|::..::..||||.||:.|:...|:|...::....|:....|
plant   377 LGTSLTIIDQSEKKVMWAVVVAIATVMTYVATFSIGAGPITWVYSSEIFPLRLRSQGSSMGVVVN 441

  Fly   469 WLLAFVVTKTFVNLNDGLGIGGTFWLFAGLTVVGVIFVYFAVPETKGKSLNEIQQELAG-----N 528
            .:.:.|::.:|:.::..:..||.|:||.|:..|..:|.|..:|||:|:.|.::.:..:|     :
plant   442 RVTSGVISISFLPMSKAMTTGGAFYLFGGIATVAWVFFYTFLPETQGRMLEDMDELFSGFRWRDS 506

  Fly   529 RSTPQAIP 536
            :|.|:..|
plant   507 KSKPKGNP 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 100/387 (26%)
MFS 118..508 CDD:119392 110/420 (26%)
PMT5NP_188513.1 MFS_PLT 42..494 CDD:340995 122/462 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.