DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nebu and AT2G20780

DIOPT Version :10

Sequence 1:NP_648605.1 Gene:nebu / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_179671.2 Gene:AT2G20780 / 816607 AraportID:AT2G20780 Length:526 Species:Arabidopsis thaliana


Alignment Length:525 Identity:155/525 - (29%)
Similarity:249/525 - (47%) Gaps:53/525 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LESAENGAKYGSRQPVKIV--KASDNGRTSSTPHDQENLLGNMVHTSTSNNSQKWPQYVAALAAA 91
            |....||.  ||..|...|  |.:...|..|...:.:|      |......:.:..:||.|.|  
plant     5 LPEVGNGG--GSGFPAVSVGNKKNKYQRMDSDAEESQN------HREAEARNSRTRKYVMACA-- 59

  Fly    92 GGAFAA--GTVLGWTSPAETEIVDRG--EGYDFPVDKD-QFSWVGSAMTLGAACVCIPIGFLI-- 149
              .||:  ..:||:         |.|  .|....:.:| :.:.|.:.:.:|:..:....|.|.  
plant    60 --FFASLNNVLLGY---------DVGVMSGAVLFIQQDLKITEVQTEVLIGSLSIISLFGSLAGG 113

  Fly   150 ---NMIGRKWTMLFLVLPFILGWTMLIWAVNVSMLYASRFILGIAGGAFCVTAPMYTGEIAQKEI 211
               :.|||||||....|.|..|..::..|.:..:|...|.:.||..|...:.||:|..||:....
plant   114 RTSDSIGRKWTMALAALVFQTGAAVMAVAPSFEVLMIGRTLAGIGIGLGVMIAPVYIAEISPTVA 178

  Fly   212 RGTLGSFFQLMITIGILFVYA-----VGAGVKIFW-LSIICGILPLIF-GAIFFFMPESPTYLVS 269
            ||...||.::.|.:|||..|.     .|..|.|.| :.:..||||.:| |.....:||||.:||.
plant   179 RGFFTSFPEIFINLGILLGYVSNYAFSGLSVHISWRIMLAVGILPSVFIGFALCVIPESPRWLVM 243

  Fly   270 KDRSENAIKSIQWLRGKEYDYEPELAELRETDRETKANKVN-VWAAL--NRPVTRKALAISMGLM 331
            |.|.::|.:.:.....::.:.|..|||::.....|:.::.. ||..|  ..||.||.|.:..|:.
plant   244 KGRVDSAREVLMKTNERDDEAEERLAEIQLAAAHTEGSEDRPVWRELLSPSPVVRKMLIVGFGIQ 308

  Fly   332 FFQQVCGINAVIFYASRIFLEANTGIEAEW----ATILIGIMQVVATFVSTLVVDKLGRRILLLA 392
            .|||:.||:|.::|:..|..||  ||:.|.    ||:.:|:.:.|....:|.::|.:||:.||..
plant   309 CFQQITGIDATVYYSPEILKEA--GIQDETKLLAATVAVGVTKTVFILFATFLIDSVGRKPLLYV 371

  Fly   393 SGISMAISTTAIGVYFFLQKQDAAQVVSLGWLPVASLCLFIIMFSIGYGPVPWLMMGELFATDIK 457
            |.|.|.:....:........|....:.    |.:..:|..:..||||.|||.|::..|:|...::
plant   372 STIGMTLCLFCLSFTLTFLGQGTLGIT----LALLFVCGNVAFFSIGMGPVCWVLTSEIFPLRLR 432

  Fly   458 GFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGTFWLFAGLTVVGVIFVYFAVPETKGKSLNEIQ 522
            ..|.:|....|.:.:.:|..:|::::..:.:||||::|:.::.:.|||||..||||.||||.:|:
plant   433 AQASALGAVGNRVCSGLVAMSFLSVSRAITVGGTFFVFSLVSALSVIFVYVLVPETSGKSLEQIE 497

  Fly   523 QELAG 527
            ....|
plant   498 LMFQG 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebuNP_648605.1 MFS_GLUT6_8_Class3_like 99..520 CDD:340916 135/442 (31%)
AT2G20780NP_179671.2 MFS_PLT 61..496 CDD:340995 137/449 (31%)

Return to query results.
Submit another query.