DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10960 and AT2G18480

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_179438.1 Gene:AT2G18480 / 816363 AraportID:AT2G18480 Length:508 Species:Arabidopsis thaliana


Alignment Length:499 Identity:140/499 - (28%)
Similarity:235/499 - (47%) Gaps:54/499 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 MVHTSTSNNSQKWPQ-------YVAALAAAGGAFAAGTVLGWTSPAETEIVDRGEGYDFPVDKDQ 126
            |||....|.....|.       :..|:.|:..:...|...|..|.|:..|.|     |..::..|
plant     1 MVHADGHNFPGSDPNPHMNKFAFGCAIVASIISIIFGYDTGVMSGAQIFIRD-----DLKINDTQ 60

  Fly   127 FSWVGSAMTLGAACVCIPIGFLINMIGRKWTMLFLVLPFILGWTMLIWAVNVSMLYASRFILGIA 191
            ...:...:.|.|....:..|...::|||::|:....:.|::|..::.:..|..:|...|.|.|:.
plant    61 IEVLAGILNLCALVGSLTAGKTSDVIGRRYTIALSAVIFLVGSVLMGYGPNYPVLMVGRCIAGVG 125

  Fly   192 GGAFCVTAPMYTGEIAQKEIRGTLGSFFQLMITIGILFVYAVG-----AGVKIFWLSIICGI--- 248
            .|...:.||:|:.||:....||.|.|..:|.|::|||..|...     ..:|:.| .::.||   
plant   126 VGFALMIAPVYSAEISSASHRGFLTSLPELCISLGILLGYVSNYCFGKLTLKLGW-RLMLGIAAF 189

  Fly   249 --LPLIFGAIFFFMPESPTYLVSKDRSENAIKSIQWLRGKEYDYEP-----------ELAELRET 300
              |.|.||  ...|||||.:||.:.|.|.|.|.:..:...|.:.|.           ::.|::|.
plant   190 PSLILAFG--ITRMPESPRWLVMQGRLEEAKKIMVLVSNTEEEAEERFRDILTAAEVDVTEIKEV 252

  Fly   301 DR--ETKANKVNVWAAL---NRPVTRKALAISMGLMFFQQVCGINAVIFYASRIFLEANTGIEAE 360
            ..  :.|.:..:||..|   .||..|..|..::|:.||:...||.||:.|:.|||.:|  |:.::
plant   253 GGGVKKKNHGKSVWRELVIKPRPAVRLILIAAVGIHFFEHATGIEAVVLYSPRIFKKA--GVVSK 315

  Fly   361 ----WATILIGIMQVVATFVSTLVVDKLGRRILLLASGISMAISTTAIGVYFFLQKQDAAQVVSL 421
                .||:.:|:.:.....::|.::||:|||.|||.|...|..:.|::.|...:.::..    .|
plant   316 DKLLLATVGVGLTKAFFIIIATFLLDKVGRRKLLLTSTGGMVFALTSLAVSLTMVQRFG----RL 376

  Fly   422 GW---LPVASLCLFIIMFSIGYGPVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLN 483
            .|   |.:.|...|:..||||.||:.|:...|:|...::....|:....|.::...|:.:|:::.
plant   377 AWALSLSIVSTYAFVAFFSIGLGPITWVYSSEIFPLRLRAQGASIGVAVNRIMNATVSMSFLSMT 441

  Fly   484 DGLGIGGTFWLFAGLTVVGVIFVYFAVPETKGKSLNEIQQELAG 527
            ..:..||.|::|||:.|....|.:|.:|||||..|.|:::...|
plant   442 KAITTGGVFFVFAGIAVAAWWFFFFMLPETKGLPLEEMEKLFGG 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 108/389 (28%)
MFS 118..508 CDD:119392 118/422 (28%)
AT2G18480NP_179438.1 MFS_PLT 36..479 CDD:340995 131/456 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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