DRSC/TRiP Functional Genomics Resources

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Protein Alignment nebu and PMT2

DIOPT Version :10

Sequence 1:NP_648605.1 Gene:nebu / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_179210.1 Gene:PMT2 / 816110 AraportID:AT2G16130 Length:511 Species:Arabidopsis thaliana


Alignment Length:494 Identity:151/494 - (30%)
Similarity:233/494 - (47%) Gaps:74/494 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 YVAALAAAGGAFAAGTVLGWTSPAETEIVDRGEGYDFPVDKDQ----------FSWVGSAMTLGA 138
            :..|:.|:..:...|..:|..|.|...|.|     |..:...|          :|.:||    ||
plant    27 FACAILASMTSIILGYDIGVMSGAAIFIKD-----DLKLSDVQLEILMGILNIYSLIGS----GA 82

  Fly   139 ACVCIPIGFLINMIGRKWTMLFLVLPFILGWTMLIWAVNVSMLYASRFILGIAGGAFCVTAPMYT 203
            |      |...:.|||::|::.....|..|..::.:|.|...:...||:.||..|...:.||:||
plant    83 A------GRTSDWIGRRYTIVLAGFFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYT 141

  Fly   204 GEIAQKEIRGTLGSFFQLMITIGILFVYA-----------VGAGVKIFWLSII-CGILPLIFGAI 256
            .|:|....||.|.||.::.|.||||..|.           :|      |..:: .|.:|.:|.||
plant   142 TEVAPASSRGFLSSFPEIFINIGILLGYVSNYFFAKLPEHIG------WRFMLGIGAVPSVFLAI 200

  Fly   257 -FFFMPESPTYLVSKDRSENAIKSIQWLRGKEYDYEPELAELRE--------TD------RETKA 306
             ...|||||.:||.:.|..:|.|.:......:.:....|.:::.        ||      .:..|
plant   201 GVLAMPESPRWLVMQGRLGDAFKVLDKTSNTKEEAISRLNDIKRAVGIPDDMTDDVIVVPNKKSA 265

  Fly   307 NKVNVWAAL---NRPVTRKALAISMGLMFFQQVCGINAVIFYASRIFLEANTGIEAE----WATI 364
            .| .||..|   ..|..|..|...:|:.|.||..||:||:.|:..||..|  |::::    .||:
plant   266 GK-GVWKDLLVRPTPSVRHILIACLGIHFSQQASGIDAVVLYSPTIFSRA--GLKSKNDQLLATV 327

  Fly   365 LIGIMQVVATFVSTLVVDKLGRRILLLASGISMAISTTAIGVYFFLQKQDAAQVVSLGW---LPV 426
            .:|:::.:...|.|.:||:.|||.|||.|...|..|.||:|....:..::..|  :|.|   |.|
plant   328 AVGVVKTLFIVVGTCLVDRFGRRALLLTSMGGMFFSLTALGTSLTVIDRNPGQ--TLKWAIGLAV 390

  Fly   427 ASLCLFIIMFSIGYGPVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGT 491
            .::..|:..||:|.|||.|:...|:|...::....||....|.|::.::..||::|:.||.|||.
plant   391 TTVMTFVATFSLGAGPVTWVYASEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGA 455

  Fly   492 FWLFAGLTVVGVIFVYFAVPETKGKSLNEIQQELAGNRS 530
            |.||||:.|...:|.:..:|||:|..|.|| :.|.|:.|
plant   456 FLLFAGVAVAAWVFFFTFLPETRGVPLEEI-ESLFGSYS 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebuNP_648605.1 MFS_GLUT6_8_Class3_like 99..520 CDD:340916 143/467 (31%)
PMT2NP_179210.1 MFS_PLT 32..485 CDD:340995 145/478 (30%)

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