DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10960 and PMT2

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_179210.1 Gene:PMT2 / 816110 AraportID:AT2G16130 Length:511 Species:Arabidopsis thaliana


Alignment Length:494 Identity:151/494 - (30%)
Similarity:233/494 - (47%) Gaps:74/494 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 YVAALAAAGGAFAAGTVLGWTSPAETEIVDRGEGYDFPVDKDQ----------FSWVGSAMTLGA 138
            :..|:.|:..:...|..:|..|.|...|.|     |..:...|          :|.:||    ||
plant    27 FACAILASMTSIILGYDIGVMSGAAIFIKD-----DLKLSDVQLEILMGILNIYSLIGS----GA 82

  Fly   139 ACVCIPIGFLINMIGRKWTMLFLVLPFILGWTMLIWAVNVSMLYASRFILGIAGGAFCVTAPMYT 203
            |      |...:.|||::|::.....|..|..::.:|.|...:...||:.||..|...:.||:||
plant    83 A------GRTSDWIGRRYTIVLAGFFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYT 141

  Fly   204 GEIAQKEIRGTLGSFFQLMITIGILFVYA-----------VGAGVKIFWLSII-CGILPLIFGAI 256
            .|:|....||.|.||.::.|.||||..|.           :|      |..:: .|.:|.:|.||
plant   142 TEVAPASSRGFLSSFPEIFINIGILLGYVSNYFFAKLPEHIG------WRFMLGIGAVPSVFLAI 200

  Fly   257 -FFFMPESPTYLVSKDRSENAIKSIQWLRGKEYDYEPELAELRE--------TD------RETKA 306
             ...|||||.:||.:.|..:|.|.:......:.:....|.:::.        ||      .:..|
plant   201 GVLAMPESPRWLVMQGRLGDAFKVLDKTSNTKEEAISRLNDIKRAVGIPDDMTDDVIVVPNKKSA 265

  Fly   307 NKVNVWAAL---NRPVTRKALAISMGLMFFQQVCGINAVIFYASRIFLEANTGIEAE----WATI 364
            .| .||..|   ..|..|..|...:|:.|.||..||:||:.|:..||..|  |::::    .||:
plant   266 GK-GVWKDLLVRPTPSVRHILIACLGIHFSQQASGIDAVVLYSPTIFSRA--GLKSKNDQLLATV 327

  Fly   365 LIGIMQVVATFVSTLVVDKLGRRILLLASGISMAISTTAIGVYFFLQKQDAAQVVSLGW---LPV 426
            .:|:::.:...|.|.:||:.|||.|||.|...|..|.||:|....:..::..|  :|.|   |.|
plant   328 AVGVVKTLFIVVGTCLVDRFGRRALLLTSMGGMFFSLTALGTSLTVIDRNPGQ--TLKWAIGLAV 390

  Fly   427 ASLCLFIIMFSIGYGPVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGT 491
            .::..|:..||:|.|||.|:...|:|...::....||....|.|::.::..||::|:.||.|||.
plant   391 TTVMTFVATFSLGAGPVTWVYASEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGA 455

  Fly   492 FWLFAGLTVVGVIFVYFAVPETKGKSLNEIQQELAGNRS 530
            |.||||:.|...:|.:..:|||:|..|.|| :.|.|:.|
plant   456 FLLFAGVAVAAWVFFFTFLPETRGVPLEEI-ESLFGSYS 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 118/403 (29%)
MFS 118..508 CDD:119392 133/436 (31%)
PMT2NP_179210.1 Sugar_tr 29..489 CDD:278511 148/486 (30%)
MFS 31..473 CDD:119392 140/467 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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