DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10960 and PMT1

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_179209.1 Gene:PMT1 / 816109 AraportID:AT2G16120 Length:511 Species:Arabidopsis thaliana


Alignment Length:485 Identity:148/485 - (30%)
Similarity:230/485 - (47%) Gaps:71/485 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 YVAALAAAGGAFAAGTVLGWTSPAETEIVDRGEGYDFPVDKDQ----------FSWVGSAMTLGA 138
            :..|:.|:..:...|..:|..|.|...|.|     |..:...|          :|.|||    ||
plant    27 FACAILASMTSIILGYDIGVMSGASIFIKD-----DLKLSDVQLEILMGILNIYSLVGS----GA 82

  Fly   139 ACVCIPIGFLINMIGRKWTMLFLVLPFILGWTMLIWAVNVSMLYASRFILGIAGGAFCVTAPMYT 203
            |      |...:.:||::|::.....|..|..::.:|.|...:...||:.||..|...:.||:||
plant    83 A------GRTSDWLGRRYTIVLAGAFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYT 141

  Fly   204 GEIAQKEIRGTLGSFFQLMITIGILFVYAVGAGVKIFWLSII-----------CGILPLIFGAI- 256
            .|:|....||.|.||.::.|.||||..|     |..::.|.:           .|.:|.:|.|| 
plant   142 AEVAPASSRGFLTSFPEIFINIGILLGY-----VSNYFFSKLPEHLGWRFMLGVGAVPSVFLAIG 201

  Fly   257 FFFMPESPTYLVSKDRSENAIKSIQWLRGKEYDYEPELAELRE--------TD------RETKAN 307
            ...|||||.:||.:.|..:|.|.:......:.:....|.:::.        ||      .:..|.
plant   202 VLAMPESPRWLVLQGRLGDAFKVLDKTSNTKEEAISRLDDIKRAVGIPDDMTDDVIVVPNKKSAG 266

  Fly   308 KVNVWAAL---NRPVTRKALAISMGLMFFQQVCGINAVIFYASRIFLEANTGIEAE----WATIL 365
            | .||..|   ..|..|..|...:|:.|.||..||:||:.|:..||.:|  |::::    .||:.
plant   267 K-GVWKDLLVRPTPSVRHILIACLGIHFAQQASGIDAVVLYSPTIFSKA--GLKSKNDQLLATVA 328

  Fly   366 IGIMQVVATFVSTLVVDKLGRRILLLASGISMAISTTAIGVYFFLQKQDAAQVVSLGW---LPVA 427
            :|:::.:...|.|.|||:.|||.|||.|...|.:|.||:|....:..::..|  :|.|   |.|.
plant   329 VGVVKTLFIVVGTCVVDRFGRRALLLTSMGGMFLSLTALGTSLTVINRNPGQ--TLKWAIGLAVT 391

  Fly   428 SLCLFIIMFSIGYGPVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGTF 492
            ::..|:..||||.|||.|:...|:|...::....||....|.|::.::..||::|:.||.|||.|
plant   392 TVMTFVATFSIGAGPVTWVYCSEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAF 456

  Fly   493 WLFAGLTVVGVIFVYFAVPETKGKSLNEIQ 522
            .||||:.....:|.:..:|||:|..|.|::
plant   457 LLFAGVAAAAWVFFFTFLPETRGIPLEEME 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 120/402 (30%)
MFS 118..508 CDD:119392 134/435 (31%)
PMT1NP_179209.1 Sugar_tr 29..489 CDD:278511 148/483 (31%)
MFS 31..473 CDD:119392 141/466 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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