DRSC/TRiP Functional Genomics Resources

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Protein Alignment nebu and Orct

DIOPT Version :10

Sequence 1:NP_648605.1 Gene:nebu / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_524479.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster


Alignment Length:552 Identity:119/552 - (21%)
Similarity:200/552 - (36%) Gaps:118/552 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ENGAKYGSRQPVKIVKASDNGRTS--STPHDQENLLGNMVHTSTSNNSQKWPQYVAALAAAGGAF 95
            |||:.|.....:..:...:|.|.|  ...:.:|.|.|::  ..:||.::....||...:    .:
  Fly    54 ENGSIYELSPHLWNLSYPENERCSYYDVDYTEEYLNGSI--PRSSNETKTCSSYVYDRS----KY 112

  Fly    96 AAGTVLGWTSPAETEIVDRGEGYDFPVDKDQFSWVGSAMTLGAACVCIPIGFLINMIGRKWTML- 159
            ....|..|.......::.              :...|...||.....:..|.:.:.:|||.|.. 
  Fly   113 LNSAVTEWNLVCSRSLLS--------------ATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFA 163

  Fly   160 FLVLPFILGWTMLIWAVNVSMLYASRFILGIAGGAFCVTAPMYTGEIAQKEIRGTLGSFFQLMIT 224
            .|||..|.| .:...|........||.|:|.......:.|.:...|:.....|...|...|:..:
  Fly   164 SLVLQLIFG-VLAAVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFS 227

  Fly   225 IGILFVYAVGAGVKIF-----WLSIICGILPLIFGAIFFFMPESPTYLVSKDRSENAIKSIQWLR 284
            :|.:..    ||...|     ||.|...:..|:|...::.:|||..:|:.|.|.:.|...|: ..
  Fly   228 VGFMLT----AGFAYFIHDWRWLQIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIE-KA 287

  Fly   285 GKEYDYE----------PELAELRETDRETKANK--VNVWAALNRP-VTRKALAISMGLMFFQQV 336
            .||...|          .|:||.::.| |..|::  ..|:..|..| :.||.|     |:||...
  Fly   288 AKENKVEVPNEIYEQLVDEVAEKKKQD-EMAASQPAATVFDLLRYPNLRRKTL-----LIFFDWF 346

  Fly   337 CGINAVIFYASRIFLEANTGIEAEWATILIGIMQVVATFVSTLV-----------VDKLGRRILL 390
              :|:.::|.            ..|.|..:|..|:|...:|..|           :::.|||.:|
  Fly   347 --VNSGVYYG------------LSWNTNNLGGNQLVNFMISGAVEIPGYTLLLFTLNRWGRRSIL 397

  Fly   391 ----LASGISMAISTTAIGVYFFLQKQDAAQVVSLGWLPVASLCLFIIMFSIGYGPVPWLMMGEL 451
                :.:|||:..:       .|:..       .:.||.||...:..:..:..||.: ::...|.
  Fly   398 CGTMMVAGISLLAT-------IFVPS-------DMNWLIVACAMIGKLAITSSYGTI-YIFSAEQ 447

  Fly   452 FATDIKGF---AGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGTFWLFAGLTVVGVI-----FVYF 508
            |.|.::..   |.|:......:||           ..|.:.|..|....|.:.|.:     .:..
  Fly   448 FPTVVRNVGLGASSMVARVGGILA-----------PYLKLLGEIWRPLPLIICGALSLTAGLLSL 501

  Fly   509 AVPETKGKSLNEIQQ--ELAGNRSTPQAIPAE 538
            .:|||..|.:.|..:  |..|.:..||....|
  Fly   502 LLPETLNKPMPETIEDGENFGKKPAPQETAEE 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebuNP_648605.1 MFS_GLUT6_8_Class3_like 99..520 CDD:340916 99/462 (21%)
OrctNP_524479.1 2A0119 11..514 CDD:273328 113/531 (21%)

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