DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10960 and CG14605

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_649707.3 Gene:CG14605 / 40867 FlyBaseID:FBgn0037486 Length:432 Species:Drosophila melanogaster


Alignment Length:446 Identity:119/446 - (26%)
Similarity:214/446 - (47%) Gaps:42/446 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 GTVLGWTSPAETEIVDRGEGYDFPVDKDQFSWVGSAMTLGA-AC---VCIPIGFLINMIGRKWTM 158
            |..|||.||....::........|:|..:..|:|::..:|. .|   :|:|:.:    .|.|..|
  Fly     6 GISLGWFSPTLPTLISDNSPIGHPIDISEVKWIGASFGIGCLICNMVICVPVSY----FGIKKCM 66

  Fly   159 LFLVLPFILGWTMLIWAVNVSMLYASRFILGIAGGAFCVTAPMYTGEIAQKEIRGTLGSFFQLM- 222
            .|:.||.||.|.::.:|......|..|.:|||:||...|..|::..|::...:||||||||.:. 
  Fly    67 YFVPLPNILNWVLIYFASKSLYFYVCRVLLGISGGTLVVCFPVFIAEVSDNSVRGTLGSFFMMTL 131

  Fly   223 ---ITIGILFVYAVGAGVKIFWLSIICGILPLIFGAIFFFMPESPTYLVSKDRSENAIKSIQWLR 284
               ||:|.:.||.:...|    |..:...||:::..:...:||.|..|:.:...|.|.||..:.:
  Fly   132 CSGITVGFVLVYCLSYHV----LPCVVIFLPILYLCLIIPLPEPPQDLLKRGHEEKAEKSFCFYK 192

  Fly   285 ------GKEYDYEPELAELRE-------TDRETKANKVNVWAALNRPVTRKALAISMGLMFFQQV 336
                  .::.|.:.|..:||.       .::.|.|:..|       .|:.||..:...|:...|:
  Fly   193 NLSKDPAQQDDNKAEFDKLRNKVLASGIAEKITPADFFN-------KVSGKAFGLIAVLLLSNQM 250

  Fly   337 CGINAVIFYASRIFLEANTGIEAEWATILIGIMQVVATFVSTLVVDKLGRRILLLASGISMAIST 401
            .|..|:..|:|.||.:..:.:|.....|.:|::|:.....:.|:||::|||:||:.|...|.::.
  Fly   251 SGSFAIFNYSSTIFEQLGSRMEPNLCGIFLGVVQIFGLISAVLLVDRVGRRLLLIPSLAGMGLAE 315

  Fly   402 TAIGVYFFLQKQDAAQVVSLGWLPVASLCLFIIMFSIGYGPVPWLMMGELFATDIK--GFAGSLA 464
            ..:|:......||...  :.||:.:..:.:.....|.|...:.::::.||....|:  |.:.|:.
  Fly   316 LGVGLLKSFASQDFLH--NNGWIALTLMGIVSFTASAGIVALTFVIIVELLPFKIRAPGISISMC 378

  Fly   465 GTSNWLLAFVVTKTFVNLNDGLGIGGTFWLFAGLTVVGVIFVYFAVPETKGKSLNE 520
            |.|  |..|:...|:..|.:..|:..|.::.|...::|::.:...:|||:|||:.:
  Fly   379 GLS--LSVFIALITYPVLINDYGVHVTMFVSASFCLLGLVVLGIFLPETRGKSITQ 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 100/379 (26%)
MFS 118..508 CDD:119392 107/412 (26%)
CG14605NP_649707.3 MFS 1..421 CDD:119392 113/433 (26%)
MFS_1 1..387 CDD:284993 107/399 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444289
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR48021
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
65.850

Return to query results.
Submit another query.