DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10960 and slc2a12

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_956832.1 Gene:slc2a12 / 393510 ZFINID:ZDB-GENE-040426-1513 Length:610 Species:Danio rerio


Alignment Length:504 Identity:123/504 - (24%)
Similarity:221/504 - (43%) Gaps:109/504 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 DQFSWVGSAMTLGAACVCIPIGFLINMIGRKWTMLFLVLPFILGWTMLIWAVNVSMLYASRFILG 189
            :|...||| :.|||..:.:..|.:::..||::|::...|..:||..:.:..|:...|...|.::|
Zfish    82 EQEQVVGS-LLLGAFLLSLGGGTILDHYGRRFTIILTALLCVLGTLLSVCVVSFWALVVGRMLVG 145

  Fly   190 ----IAGGAFCVTAPMYTGEIAQKEIRGTLGSFFQLMITIGILFVYAVG---AGVKIFWLSIICG 247
                ::|.|.|    :|..|:|....||.....::||:.:|:|..:.:.   |||...|.....|
Zfish   146 MSVALSGTASC----LYAAEVAPAAWRGRCVCVYELMVVLGMLLGFGLSWAFAGVPDGWRFTFGG 206

  Fly   248 -ILP-LIFGAIFFFMPESPTYLVSKDRSENAIKSIQWLRGKEYDYEPELAELRETDRETKANKVN 310
             :|| |:...:...:|:||.:|:::.|.:.|..::..||....:.||...|||.......|.:::
Zfish   207 ALLPALLQAGVMPLLPDSPRFLLAQQREKEAHATLLRLRAGIKEVEPVEDELRAIRLAMGAERLH 271

  Fly   311 VWAAL--NRPVTRKALAISMGLMFFQQVCGINAVIFYASRIFLEANTGIEAEWATIL----IGIM 369
            .:..|  :|....:.|.:...|:|.||..|...::.|||.:.  ::.|.....|..|    .|::
Zfish   272 GFLDLFQSRDNMLQRLLVGAALVFLQQATGQPNILAYASTVL--SSVGFHGNEAATLASTGFGVV 334

  Fly   370 QVVATFVSTLVVDKLGRRILLLASGISMAIST--------------------------------- 401
            :|..|..:..:|||:|.:.||....:.|.:||                                 
Zfish   335 KVGGTIPAIFLVDKVGPKALLCVGVVVMMLSTATLGAITMQSRTHVSSLCRGPGNTANFTLFETG 399

  Fly   402 --------TAIGVY----------FF---------------------------LQKQDAAQVV-- 419
                    |.:|:|          |.                           |.|:|:|::.  
Zfish   400 DETDIQTNTPLGLYQPQNKLKTNAFLTSINDTREHWILNHTYDHRTALIETAELSKKDSAKIALQ 464

  Fly   420 -------SLGWLPVASLCLFIIMFSIGYGPVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTK 477
                   ||.|:.:.||.:::..|||..||:..:::..:|.|.|:|.|.|:....||....:::.
Zfish   465 SLHEVSPSLKWISLVSLLVYVAGFSISLGPMVHVVLSAIFPTGIRGKAVSVISAFNWATNLLISM 529

  Fly   478 TFVNLNDGLGIGGTFWLFAGLTVVGVIFVYFAVPETKGKSLNEIQQELA 526
            ||:.|.:.:|:....:.::.::.:.|:||...||||||:||.:|.:|||
Zfish   530 TFLTLTERIGLPTVIFSYSAMSFLLVVFVIVFVPETKGRSLEQISKELA 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 104/450 (23%)
MFS 118..508 CDD:119392 111/484 (23%)
slc2a12NP_956832.1 MFS 48..395 CDD:119392 78/319 (24%)
SP 49..573 CDD:273317 119/497 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576890
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.