DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10960 and CG42825

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_729590.1 Gene:CG42825 / 39179 FlyBaseID:FBgn0262007 Length:518 Species:Drosophila melanogaster


Alignment Length:553 Identity:125/553 - (22%)
Similarity:210/553 - (37%) Gaps:148/553 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 QPVKIVKASDNG-----RTSSTPHDQENLLGNMVHTSTSNNSQKWPQYVAALAAAGGAFAAGTV- 100
            ||..|..|...|     .....||.:.:..|.....:..|..|.     .|:.|||..|.:|.: 
  Fly    35 QPQHITPAETYGPQPPPMPPRDPHTRVDPPGGCFQRNQKNKPQS-----NAVGAAGLIFISGGMN 94

  Fly   101 LGWTSPAETEIVDRGEGYDFPVDKDQFSW-----VGSAMTLGAACVCIPIGFLINMIGRKWTMLF 160
            :.|.      |..:|..|......:..:|     :|:.:|:.          |.|.:.:|:.:.|
  Fly    95 IAWA------IGFQGPIYYQTTKHNYIAWFIGAIIGALVTMA----------LTNKVAKKYILQF 143

  Fly   161 -LVLPFILGWTMLIWAVNVSMLYASRFILGIAGGAFCVTAPM--YTGEIAQKEIRGTLGSFF-QL 221
             .||..:.|..:.....|.:...|:.::.|||.|  .|.||.  ..|||:...:||...:.. ||
  Fly   144 SSVLVTVGGLVIACTHNNGAGTTAACYLDGIANG--LVFAPFMALVGEISVPYLRGKASATLEQL 206

  Fly   222 MITIGIL-------------------FVYAVGAGVKIFWLSIICGILPLIFGAIFFFMPESPTYL 267
            ....|||                   |......||    ||.|.|:|.||.|:  ||..|||..:
  Fly   207 CFGTGILLQILYVSNWTYSSYMTYNDFTSENMKGV----LSTIYGVLALIMGS--FFTIESPVLM 265

  Fly   268 VSKDRSENAIKSIQWLRGKEYDYEPELAELRETDRETKANKVNVWAALNRPVTRKALAISMGLMF 332
            ::.:..:.||.:::.|:      :|  |.|.|...|..|.... :.|.|:.:: |:.:||..|..
  Fly   266 LANNEEQAAIDALRRLQ------KP--AVLTEETYELLAEHKR-YLAYNKNMS-KSESISKALPT 320

  Fly   333 FQQVCGINA----------VIFYASRIFLEANTGIEAEWATILIGIMQVVATFVSTLVVDKLGRR 387
            |.::..:.|          :|.|...|.:..:....:.| .|.:...:.:.:.:.:..::.|||:
  Fly   321 FMRLAYLRALNAMSISSFVIITYVVAILVSNDLRNASSW-YIGLAFCRWLGSLIPSFCMESLGRK 384

  Fly   388 I-----LLLASGISMAISTTAIGVYFFLQKQDAAQVVSLGWLPVASLCLFIIMFSIGYGPVPWLM 447
            .     ||::.|:|.|:. :...||.::     :||..|                        :|
  Fly   385 KPAVFGLLVSCGLSFAVG-SQYNVYTYM-----SQVTVL------------------------IM 419

  Fly   448 MGELFATDIKGFAGSLAGTSNWL--------------LAFVVTKTFV-------NLNDGLGIGGT 491
            :.|.||    |.|  .:..|.:|              |.| :|:.||       :.|.|.|. ..
  Fly   420 IFEFFA----GMA--FSSNSAYLTEAYPMGVKQHFIGLTF-ITEIFVFLIINVCDFNFGQGY-NY 476

  Fly   492 FWLFAGLTVVGVIFVYFAVPETKGKSLNEIQQE 524
            |::...:.:.|||.....:|||:..:|...|::
  Fly   477 FYIMGAMYLAGVILGVLTLPETRRMTLQGAQEQ 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 90/413 (22%)
MFS 118..508 CDD:119392 101/453 (22%)
CG42825NP_729590.1 MFS 116..490 CDD:119392 99/440 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444307
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.