DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10960 and CG4797

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_726368.2 Gene:CG4797 / 37770 FlyBaseID:FBgn0034909 Length:533 Species:Drosophila melanogaster


Alignment Length:494 Identity:132/494 - (26%)
Similarity:232/494 - (46%) Gaps:34/494 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 KASDNGRTSSTPHDQENLLGN---MVHTSTSNNSQKWPQYVAALAAAGGAFAAGTVLGWTSPAET 109
            |||.:.|..||..:|::...|   |:|           |.:|..|....:...|..:|:::....
  Fly    31 KASYSSRKLSTIDEQDDDAANRRGMMH-----------QILATCAVLLLSAGCGMPIGFSAILLP 84

  Fly   110 EIVDRGEGYDFPVDKDQFSWVGSAMTLGAACVCIPIGFLINMIGRKWTMLFLVLPFILGWTMLIW 174
            :::| ....:.|:|.:..||:.|..:|......:..|.|.:.:||:.|::..|:|.:|||:.|..
  Fly    85 QLMD-NNSTEIPIDVETGSWIASVHSLATPFGSLLSGPLADYLGRRRTLILSVIPLLLGWSTLAI 148

  Fly   175 AVNVSMLYASRFILGIAGGAFCVTAPMYTGEIAQKEIRGTLGSFFQLMITIGILFVYAVGAGVKI 239
            |.::.::..:||:.|.|.|.......:|..|.|:..:|..|.....:..:.|||.||::|:  .:
  Fly   149 AKSIKVVIFARFLCGFATGILGGPGQVYIAETAEPNLRSLLIGAPYVAYSSGILMVYSLGS--MM 211

  Fly   240 FWLSI--ICGILPLIFGAIFFFMPESPTYLVSKDRSENAIKSIQWLRGKEYDYEPELAELRE--- 299
            :|.|:  ...:|||:......|:||:|.:|:.....:.|::::.:|||.|...:.||.::::   
  Fly   212 YWRSVAWCANVLPLLSMVSISFIPETPAWLLRNGHEKRALQALSFLRGSEISAQKELNDMKQRLA 276

  Fly   300 TDRETKANKVNVWAALNRPVTRKALAISMGLMFFQQVCGINAVIFYASRIFLEANTGIEAEWATI 364
            .:|.|.....|::....:.|..|.|.|.:.....|...|...|||||..:..|.....:::.|.|
  Fly   277 KERVTTKTNENIFQLCCQRVAIKPLVIVIVFSLLQMFSGTFIVIFYAVDMISEFGAEFDSKQAAI 341

  Fly   365 LIGIMQVVATFVSTLVVDKLGRRILLLASGISMAISTTAIGVY----FFLQKQDAAQVVSLGWLP 425
            ...:::|:...|..:|:..:.||.:::.|||...:....:.||    |...|......|..|.| 
  Fly   342 ATAVVRVICCMVFCVVLIFVRRRRIMIVSGIGSGLFCLVLSVYQYARFDQPKMSYDVFVGAGCL- 405

  Fly   426 VASLCLFIIMFSIGYGPVPWLMMGELFATDIKG-FAGSLAGTSNWLLAFVVTKTFVNLNDGLGIG 489
                 |..|:|:.....:|.:|:||||...|:| .||.:..:.|..| |:..|.|..|...|.:.
  Fly   406 -----LGYIIFNTALMVMPGIMIGELFPARIRGRTAGGVFASMNVAL-FIFAKKFPALQAMLKMR 464

  Fly   490 GTFWLFAGLTVVGVIFVYFAVPETKGKSLNEIQQELAGN 528
            |.|.:|...:.:...|:....|||||:||..|:....|:
  Fly   465 GVFLVFGVSSFLLTAFMCLFQPETKGRSLEHIEDYFNGD 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 98/366 (27%)
MFS 118..508 CDD:119392 107/399 (27%)
CG4797NP_726368.2 MFS 64..484 CDD:119392 111/429 (26%)
Sugar_tr 89..497 CDD:278511 114/416 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR48021
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.