DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10960 and CG3285

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001285583.1 Gene:CG3285 / 33547 FlyBaseID:FBgn0031522 Length:466 Species:Drosophila melanogaster


Alignment Length:448 Identity:138/448 - (30%)
Similarity:218/448 - (48%) Gaps:21/448 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 QYVAALAAAGGAFAAGTVLGWTSPAETEIVDRGEGYDFPVDKDQFSWVGSAMTLGAACVCIPIGF 147
            |::..|......|:.|..:||.||...::.......||||...|.||:||.:.:|:....:..|.
  Fly    25 QFLVTLLLNIATFSHGLGVGWMSPVMRDLQTDESPLDFPVLVSQVSWIGSLVGIGSVMGNLIAGL 89

  Fly   148 LINMIGRKWTMLFLVLPFILGWTMLIWAVNVSMLYASRFILGIAGGAFCVTAPMYTGEIAQKEIR 212
            |::.||||..:.|:.:|:...|.::.:..:|..||..|.:.||.|||..|..|.:..|||...:|
  Fly    90 LMDRIGRKMVLFFIAIPYTTFWCLIYFVQSVEFLYIGRLMAGITGGACYVVLPTFISEIADTNVR 154

  Fly   213 GTLGSFFQLMITIGILFVYAVGAGVKIFWL-SIICGILPLIFGAIFFFMPESPTYLVSKDRSENA 276
            |.|||...|.:..|:|..|.|...|..|.. ..|.| ||:.:....|.:||:|.:||.|.:.|.|
  Fly   155 GRLGSIILLSVNTGVLAGYIVSTRVDYFTSPPFIIG-LPVCYFICNFLIPETPHHLVRKGKFEAA 218

  Fly   277 IKSIQW---LRGKEYDYEPELAELRE---TDRETKANKVNVWAALNRPVTRKALAISMGLMFFQQ 335
            .:|..:   :|..:...|.|..|::.   .::..||...:....:.||.. ||.|.:..|:...|
  Fly   219 KRSFMFYKNIRKNDIKAEDEFEEMKYLLIKEQTEKAKSFDYRDFITRPAF-KAYASAAVLLISNQ 282

  Fly   336 VCGINAVIFYASRIFLEANTGIEAEWATILIGIMQVVATFVSTLVVDKLGRRILLLASGISMAIS 400
            ......|..|.:.:|..::|.:.....||:||::|:|..:|:||:.||.|||||:|.|.:..::.
  Fly   283 FSASFCVTTYLADVFAASHTTLNLGMCTIIIGVLQIVGNYVTTLLCDKYGRRILMLTSTLGASVC 347

  Fly   401 TTAIGVYFFLQKQDAAQVVSLGWLPVASLCLFIIMFSIGYGPVPWLMMGELFATDIKG-----FA 460
            .||.|.:.|.  .:||.:.|:.|||:..|..|:.:.:||.....::::.|||...|:.     |.
  Fly   348 LTAFGTFTFF--AEAADLSSVDWLPLVILSCFVFLCNIGLVGCLFVVLVELFPAKIRSVSVSTFV 410

  Fly   461 GSLAGTSNWLLAFVVTKTFVNLNDGLGIGGTFWLFAGLTVVGVIFVYFAVPETKGKSL 518
            ..|:.|     .|:..|.|.......|...|.|..:|:|....::..|.:.||.||||
  Fly   411 VILSST-----VFLTLKIFPICMAVWGTSVTMWSCSGITFFSFLYFCFFLEETNGKSL 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 115/368 (31%)
MFS 118..508 CDD:119392 123/401 (31%)
CG3285NP_001285583.1 MFS 29..443 CDD:119392 128/422 (30%)
MFS_1 32..419 CDD:284993 121/395 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444285
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR48021
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
65.850

Return to query results.
Submit another query.