DRSC/TRiP Functional Genomics Resources

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Protein Alignment nebu and Slc2a4

DIOPT Version :10

Sequence 1:NP_648605.1 Gene:nebu / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001416984.1 Gene:Slc2a4 / 25139 RGDID:2711 Length:518 Species:Rattus norvegicus


Alignment Length:483 Identity:140/483 - (28%)
Similarity:222/483 - (45%) Gaps:66/483 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 QENLLGNMVHTSTSNNSQKWPQYVAALAAAGGAFAAGTVLGWTSPAETEIVDRGE-----GYDFP 121
            |:.:.|.:|              :|..:|..|:...|..:|..: |..:::::..     |...|
  Rat    17 QQRVTGTLV--------------LAVFSAVLGSLQFGYNIGVIN-APQKVIEQSYNATWLGRQGP 66

  Fly   122 VDKDQFSWVGSAMTLGAACVCI----------PIGFLINMIGRKWTMLFLVLPFILGWTML---I 173
            ...|... .|:..||.|..|.|          .||.:...:|||..||...:..:||..::   .
  Rat    67 GGPDSIP-QGTLTTLWALSVAIFSVGGMISSFLIGIISQWLGRKRAMLANNVLAVLGGALMGLAN 130

  Fly   174 WAVNVSMLYASRFILGIAGGAFCVTAPMYTGEIAQKEIRGTLGSFFQLMITIGILFVYAVG---- 234
            .|.:..:|...||::|...|......|||.||||...:||.||:..||.|.||||....:|    
  Rat   131 AAASYEILILGRFLIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAIVIGILVAQVLGLESM 195

  Fly   235 AGVKIFW-LSIICGILPLIFGAIFF-FMPESPTYL-VSKDRSENAIKSIQWLRGKEYDYEPELAE 296
            .|....| |.:...:||.:...:.. |.||||.|| :.::....|.||::.|.|.. |....|||
  Rat   196 LGTATLWPLLLAITVLPALLQLLLLPFCPESPRYLYIIRNLEGPARKSLKRLTGWA-DVSDALAE 259

  Fly   297 LRETDRETKANK-VNVWAALNRPVTRKALAISMGLMFFQQVCGINAVIFYASRIFLEANTGIE-A 359
            |::..|:.:..: :::...|.....|:.|.|::.|...||:.|||||.:|::.||..|  |:| .
  Rat   260 LKDEKRKLERERPLSLLQLLGSRTHRQPLIIAVVLQLSQQLSGINAVFYYSTSIFELA--GVEQP 322

  Fly   360 EWATILIGIMQVVATFVSTLVVDKLGRRILLLASGISMAISTTAIGVYFFLQKQDAAQVVSLGWL 424
            .:|||..|::..|.|.||.|:|::.|||.|.|.....|......:.|...|.:    :|.|:.::
  Rat   323 AYATIGAGVVNTVFTLVSVLLVERAGRRTLHLLGLAGMCGCAILMTVALLLLE----RVPSMSYV 383

  Fly   425 PVASLCLFIIMFSIGYGPVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIG 489
            .:.::..|:..|.||.||:||.::.|||:...:..|.::||.|||...|:|         |:|  
  Rat   384 SIVAIFGFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTCNFIV---------GMG-- 437

  Fly   490 GTFWLFAGLTVVGVIFVYFAVPETKGKS 517
                 |..:.|..:.|..|..|..:|::
  Rat   438 -----FQYVAVGSLPFAGFPTPVARGEA 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebuNP_648605.1 MFS_GLUT6_8_Class3_like 99..520 CDD:340916 133/446 (30%)
Slc2a4NP_001416984.1 Interaction with SRFBP1. /evidence=ECO:0000250|UniProtKB:P14672 7..13
MFS_GLUT_Class1 26..451 CDD:340989 134/449 (30%)
Blue background indicates that the domain is not in the aligned region.

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