DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nebu and Slc2a1

DIOPT Version :10

Sequence 1:NP_648605.1 Gene:nebu / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_620182.1 Gene:Slc2a1 / 24778 RGDID:3704 Length:492 Species:Rattus norvegicus


Alignment Length:490 Identity:147/490 - (30%)
Similarity:230/490 - (46%) Gaps:60/490 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 LAAAGGAFAAGTVLGWTS---PAETEIVDR----------GEGYDFPVDKDQFSWVGSAMTLGAA 139
            :.|.|||.......|:.:   .|..::::.          ||..........:|...:..::|..
  Rat    13 MLAVGGAVLGSLQFGYNTGVINAPQKVIEEFYNQTWNHRYGESIPSTTLTTLWSLSVAIFSVGGM 77

  Fly   140 CVCIPIGFLINMIGRKWTMLFL-VLPFI----LGWTMLIWAVNVSMLYASRFILGIAGGAFCVTA 199
            .....:|..:|..||:.:||.: :|.|:    :|::.|  ..:..||...|||:|:..|......
  Rat    78 IGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKL--GKSFEMLILGRFIIGVYCGLTTGFV 140

  Fly   200 PMYTGEIAQKEIRGTLGSFFQLMITIGILFVYAVGAGVKIFWLSIICG---ILPLIFGAIFF--- 258
            |||.||::...:||.||:..||.|.:|||.       .::|.|..|.|   :.||:...||.   
  Rat   141 PMYVGEVSPTALRGALGTLHQLGIVVGILI-------AQVFGLDSIMGNADLWPLLLSVIFIPAL 198

  Fly   259 -------FMPESPTYLVSKDRSENAIKSI-QWLRGKEYDYEPELAELRETDRE-TKANKVNVWAA 314
                   |.||||.:|:.....||..||: :.|||.. |...:|.|::|..|: .:..||.:...
  Rat   199 LQCILLPFCPESPRFLLINRNEENRAKSVLKKLRGTA-DVTRDLQEMKEEGRQMMREKKVTILEL 262

  Fly   315 LNRPVTRKALAISMGLMFFQQVCGINAVIFYASRIFLEANTGIEAE-WATILIGIMQVVATFVST 378
            ...|..|:.:.|::.|...||:.|||||.:|::.||.:|  |::.. :|||..||:....|.||.
  Rat   263 FRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKA--GVQQPVYATIGSGIVNTAFTVVSL 325

  Fly   379 LVVDKLGRRILLLASGISMA----ISTTAIGVYFFLQKQDAAQVVSLGWLPVASLCLFIIMFSIG 439
            .||::.|||.|.|.....||    :.|.|:.:        ..|:..:.:|.:.::..|:..|.:|
  Rat   326 FVVERAGRRTLHLIGLAGMAGCAVLMTIALAL--------LEQLPWMSYLSIVAIFGFVAFFEVG 382

  Fly   440 YGPVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGTFWLFAGLTVVGVI 504
            .||:||.::.|||:...:..|.::||.|||...|:|...|..:....| ...|.:|..|.|:..|
  Rat   383 PGPIPWFIVAELFSQGPRPAAVAVAGFSNWTSNFIVGMCFQYVEQLCG-PYVFIIFTVLLVLFFI 446

  Fly   505 FVYFAVPETKGKSLNEIQQEL-AGNRSTPQAIPAE 538
            |.||.||||||::.:||.... .|..|.....|.|
  Rat   447 FTYFKVPETKGRTFDEIASGFRQGGASQSDKTPEE 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebuNP_648605.1 MFS_GLUT6_8_Class3_like 99..520 CDD:340916 137/458 (30%)
Slc2a1NP_620182.1 MFS_GLUT_Class1 14..458 CDD:340989 140/464 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 468..492 4/14 (29%)

Return to query results.
Submit another query.