DRSC/TRiP Functional Genomics Resources

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Protein Alignment nebu and slcf-2

DIOPT Version :10

Sequence 1:NP_648605.1 Gene:nebu / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_508586.2 Gene:slcf-2 / 192084 WormBaseID:WBGene00006865 Length:595 Species:Caenorhabditis elegans


Alignment Length:607 Identity:123/607 - (20%)
Similarity:213/607 - (35%) Gaps:195/607 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 EEANKKSGSNNEESSHLLESAENGAKYGSRQPVKIVKASDNGRTS-----------STPH----- 60
            |:||.:.|:......|:            |.| :||.....|..|           :..|     
 Worm    34 EDANPEDGNAKPPEIHI------------RMP-RIVNTCPPGSPSLRLALVVLSIGAASHFLLFL 85

  Fly    61 DQ--ENLLGN------MVHTSTSNNSQKWPQYVAA--LAAAGGAFAAGTVLGWTSPAETEIVDRG 115
            |.  :|||..      .|:.:..|.:..|...|::  ...|.|.|.|            .::...
 Worm    86 DSVVDNLLPAAMPFFLSVYENKENANHAWEMLVSSRIYGLAIGCFVA------------VLMSHR 138

  Fly   116 EGYDFPVDKDQFSWVGSAMTLGAACVCIPIGFLINMIGRKWTMLFLVLPFILGWTMLIWAVNVSM 180
            .|...||                     .:|.::::||...|:|...:|.           .|::
 Worm   139 HGRKLPV---------------------VVGTILDVIGVVLTLLITSVPH-----------GVTV 171

  Fly   181 LYASRFILGIAGGAFCVTAPMYTGEIAQKEIRGTLGSFFQLM--------ITIGI--------LF 229
            ....|.|.||..|.......:...|:...:.|||:.:...:.        :||.:        |:
 Worm   172 ATVGRLINGIGQGMVQTAGSVMLSELPPLKTRGTVLATLTMWACMGELGGMTISLDEFFGTPELW 236

  Fly   230 VYAVGAGVKIFWLSIICGILPLIFGAIFFFMPESPTYLVSKDRSENAIKSIQW------------ 282
            .:|:|     |.|.::...|.:|:.|     ||||.||..::|.:.|.|::.:            
 Worm   237 QWAMG-----FPLLLLLPALVVIWHA-----PESPRYLFIENREDEARKAMSYYQSPADCKQSIE 291

  Fly   283 --LRGKEYDYEPELAELRETDRETKANKVNVWAALNRPVT----RKALAISMGLMFFQQVCGIN- 340
              |..|::..|....::.|.....|.....:.:::...:.    .:||.|:   :|.|....:: 
 Worm   292 EILLEKQFTMEMIKEKVDENGNTRKKEPAGLLSSICERLKDGRFTRALLIA---LFVQTFVHLDD 353

  Fly   341 -AVIFYASRIFLEANTGI---EAEWATILIGIMQVVATFVSTLVVDKLGRRILLLASGISMAIST 401
             ..|.|:::||  .|.|:   :|:.|::::.:.|.|.:.......|...||.||        |..
 Worm   354 WLWISYSTQIF--ENFGLTSGKAQTASLIMSLPQAVISIALLGCFDNFDRRTLL--------IVP 408

  Fly   402 TAIGVYF-FL----QKQDAAQVVSLGWLPVASLCLFIIMFSIGYGPVPWLMMGELFATDIK---- 457
            |.:.|.| ||    .....:.|:.| ::.:..|..|.:..:...|...:.::.|||..:.|    
 Worm   409 TILSVIFGFLAIVFSSPGLSNVIPL-FVIIPILATFDLSVAAISGESAYAIVPELFLANDKVLGS 472

  Fly   458 --------GFAGSLA----------GTSNWLLAFVVTKTFVNLNDGLGIGGTFWLFAGLTVVGVI 504
                    ||.|.|.          |.||.|:.||...|               ::.|:|     
 Worm   473 AIVGIVQNGFGGVLTNCLLTALNTHGISNVLIPFVAMNT---------------VYVGVT----- 517

  Fly   505 FVYFAVPETKGKSLNEIQQELA 526
              |..:|||.||:..||.:..:
 Worm   518 --YKWLPETAGKTPQEINRHFS 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebuNP_648605.1 MFS_GLUT6_8_Class3_like 99..520 CDD:340916 97/486 (20%)
slcf-2NP_508586.2 MFS 110..532 CDD:475125 103/511 (20%)

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