DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nebu and K09C4.4

DIOPT Version :10

Sequence 1:NP_648605.1 Gene:nebu / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001361998.1 Gene:K09C4.4 / 187194 WormBaseID:WBGene00019549 Length:524 Species:Caenorhabditis elegans


Alignment Length:471 Identity:103/471 - (21%)
Similarity:187/471 - (39%) Gaps:129/471 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 SWVGSAMTLGAACVCIPIGFLINMI---GRKWTMLF----LVLPFILGWTMLIWAVNVSMLYASR 185
            |.:.|:.|:|.....|   |||.|.   |||:.:::    |::...|...:..::.:......|:
 Worm    63 SMITSSETVGTLLSLI---FLIPMADTKGRKFLVIYMRSALLILSALCQVLSAYSQSAEFFIMSK 124

  Fly   186 FILGIAG--GAFCVTAPMYTGEIAQKEIRGTLGSFFQLMITIGIL-------------------F 229
            ...|:..  |.| :|| ::..|.|..:.||.  :...|::.:||:                   |
 Worm   125 LFEGLQHPLGTF-LTA-LFIAECAPDKNRGF--ACTSLVVLVGIVRMIMLPIASPAVLGKADTWF 185

  Fly   230 VYAVGAGVKIFWLSI-ICGILPLIFGAIFFFMPESPTYLVSKDRSENAIKSIQWLRGKE--YDYE 291
            |:.:.|.:..|.:.| :|.            :||||.:||.::|.|.|.:||::..|.:  .::.
 Worm   186 VFPLAALISSFLVLIWVCR------------LPESPKWLVCQNRIEEAKRSIEYYHGNDSSENFN 238

  Fly   292 PELAELRETDRETKANKVNVWAALNRPVTRKALAISMGLMFFQQVCGINAVIFYASRIFLEANTG 356
            ..|..:.:....|..:.:::...|.....|:...:....:||..:...||:..|.  :.|..:.|
 Worm   239 NVLLSIVKEKNLTIESHISLREVLQNDTLREGFKVLFSFLFFILIDSDNALSVYT--VLLHKSAG 301

  Fly   357 IEAEWA---TILIGIMQVVATFVSTLVVDKLGRRILLLASGISMAISTTAI-----GVYFFLQKQ 413
            ...:.|   .::|.|:.....|:.||::|.||||......|..:.|.:..:     .:|||    
 Worm   302 FTTQEAININLIISIVFFPTQFIGTLLIDYLGRRPAFCIGGFMIFIKSCLLLLVQFAIYFF---- 362

  Fly   414 DAAQVVSLGWLPVASLCLFIIMFSIGYGP-------VPWLMMGELF-------ATDIKGFAGSLA 464
             .|.::        :..:.||:..:|.||       :..|.:.|||       .:.|..|. |||
 Worm   363 -GANLI--------TKIIDIIIACLGSGPNATGMSSLRILFITELFPPSARTSISQIMLFT-SLA 417

  Fly   465 GTSNWLLAF---------------VVTKTFVNLNDGLGIGGTFWLFAGLTVVGVIFVYFAVPETK 514
            ..|:.|.:|               |.|:.|..                      |::|..:||||
 Worm   418 INSSLLSSFPLLYSWFPPAFFTPLVFTQMFFG----------------------IYLYRYMPETK 460

  Fly   515 GKSLNEI----QQELA 526
            |:::.:|    .:|:|
 Worm   461 GRAVCDIIESFDEEVA 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebuNP_648605.1 MFS_GLUT6_8_Class3_like 99..520 CDD:340916 100/459 (22%)
K09C4.4NP_001361998.1 MFS 42..462 CDD:475125 99/455 (22%)

Return to query results.
Submit another query.