DRSC/TRiP Functional Genomics Resources

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Protein Alignment nebu and F11D5.5

DIOPT Version :10

Sequence 1:NP_648605.1 Gene:nebu / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_508570.4 Gene:F11D5.5 / 184346 WormBaseID:WBGene00017382 Length:382 Species:Caenorhabditis elegans


Alignment Length:358 Identity:76/358 - (21%)
Similarity:143/358 - (39%) Gaps:55/358 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 MYTGEIAQKEIRGTLGSFFQLMITIGILFVYAVGA----GVKIFWLSIICGILPLIFGAI----- 256
            |:..|.:....||...:|......|..|.:::|.:    |....|.     :.|| ||.|     
 Worm     1 MFIVESSPDNCRGFASAFLIFAFVITKLVMFSVASPNLLGTSQVWF-----VFPL-FGMISSTIV 59

  Fly   257 FFFM---PESPTYLVSKDRSENAIKSIQWLRGKEYDYEPELAELRETDRETKANKVNVWAALNRP 318
            |.||   ||||.:|:.:|:.|.|..||::..||.......:....:....|..|::::....:..
 Worm    60 FCFMVQLPESPKWLIQQDKVEEAKVSIRFYHGKNCTIHEVVTSFIKEKNLTDKNRISLKQIWDNE 124

  Fly   319 VTRKALAISMGLMFFQQVCGINAVIFYASRIFLEANTGIEAEWA---TILIGIMQVVATFVSTLV 380
            ..|:.|.|...|:.|.:.........|.  |.:..:.|...:.|   .::|.|..:...|..|.:
 Worm   125 TLREGLKIVFALLLFLEFDTSYVTSVYT--IDMHKSAGFTVQQALNINLIITIFSLPTKFFGTFL 187

  Fly   381 VDKLGRRILLLASGI-----SMAISTTAIGVYFFLQKQDAAQVVSLGWLP--VASLCLFI--IMF 436
            .|.:|||.:.:.:.:     :..|.:..|.:|.|          ...||.  ..::..|:  ::.
 Worm   188 SDSIGRRPIFVIAALLQYFRTCIIFSLEITIYIF----------GSSWLTRITYNMVEFLAALVS 242

  Fly   437 SIGYGPVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGTFW---LFAGL 498
            :.|...:..|:..|||....:...|.....::.|:.|.:..:|..:|       |.:   .|...
 Worm   243 ATGVNSLRLLLTMELFPPSARTVIGQTQMIASILIGFPILSSFPIIN-------TMFPPIFFVPF 300

  Fly   499 TVVGV---IFVYFAVPETKGKSLNEIQQELAGN 528
            .:..:   |:::..:|||:|:::.:|.:.|..|
 Worm   301 VITQLLLGIYLFRHMPETRGRAVYDIIESLDKN 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebuNP_648605.1 MFS_GLUT6_8_Class3_like 99..520 CDD:340916 73/348 (21%)
F11D5.5NP_508570.4 MFS <1..321 CDD:475125 72/344 (21%)

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