DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10960 and hmit-1.2

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_507624.1 Gene:hmit-1.2 / 180206 WormBaseID:WBGene00013074 Length:613 Species:Caenorhabditis elegans


Alignment Length:619 Identity:151/619 - (24%)
Similarity:243/619 - (39%) Gaps:163/619 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 KASDNGRTSSTPHDQEN-LLGNMVHTSTSNNSQKWPQYVAALAAAGGAFAAGTVLGWTSPAETEI 111
            |.|::||    |..::| .||..|             |:...||..|.|..|        .:|.:
 Worm     7 KVSESGR----PRPEKNPKLGFFV-------------YLLGSAAIIGGFLFG--------YDTSV 46

  Fly   112 VDRGEGY--DFPVDKDQFS-W--VGSAMTLGAACVCIPI-GFLINMIGRKWTMLFLVLPFILG-- 168
            |.....|  :.|..|...: |  |..::|.|.|.|.... |...:..|||..::...|.|:.|  
 Worm    47 VSAAMLYVPEAPGLKPMGTVWKEVIVSITPGMAAVGAWFSGAGSDRYGRKPIIIGSTLIFVCGAV 111

  Fly   169 -----WTMLIWAVNVSMLYASRFILGIAGGAFCVTAPMYTGEIAQKEIRGTLGSFFQLMITIGIL 228
                 ||.::..:       .|..||:..|...:..|:|.||.:...:||||.|.|.:||:.|.:
 Worm   112 ICAVAWTKIVMLI-------GRIFLGVGIGFASMVVPVYLGEASPTHVRGTLVSAFAMMISFGQV 169

  Fly   229 FVYAVGAGVKIFW---------LSIICGILPLIFGAIFFFMPESPTYLVSKDRSENAIKSIQWLR 284
            ....:| ||..:|         :....||..||....|.|:||:|.:|.....:|.|.:.::.:.
 Worm   170 VANIMG-GVFSYWEPYTIGWRLMFAFAGIPALIQFVCFIFLPETPRWLYENGHTEQAEQVLEKIY 233

  Fly   285 GKEYDY-EPELAEL--------RETDRETKANKVNVWAALNRPVTRKALAISMGLMFFQQVCGIN 340
            |...:: |.||||:        ::.:.|.|:..| :|..|..|...||..|...|..|||:.|||
 Worm   234 GGNTEWIEYELAEIKTYAEERQKQMEEEKKSGPV-IWRILKTPHVLKACFIGSMLQAFQQLAGIN 297

  Fly   341 AVIFYASRIFLEANTGIE----AEWATILIGIMQVVATFVSTLVVDKLGRRILLLASGISMAIST 401
            .:::|.:.|...|  |||    ..|.::::.|..::..|.....::|||||.|.|.|...:.:|.
 Worm   298 TILYYTADIIRSA--GIENYHTIIWISVILSICNLIGPFAPMFFIEKLGRRKLFLFSCAGVVVSL 360

  Fly   402 TAIGVYFFLQKQDAA-------------------------------------------------- 416
            ..|||.|.|...|:|                                                  
 Worm   361 VLIGVSFLLVGNDSAPNFDRSAYLLAGNYQSNGEAESCLMLSNCDSCVTSEHCGFCEDSETRTGF 425

  Fly   417 ------------------------------QVVSLGW-----------LPVASLCLFIIMFSIGY 440
                                          ...|..|           ||:..:.::::.||.|:
 Worm   426 CLPVDHNDVTLYSSTGLCTNGLDKSNSSFPNATSYVWQKHHCTTSYTILPIVMMGVYLLTFSCGF 490

  Fly   441 GPVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGTFWLFAGLTVVGVIF 505
            ..:||::..|.:....:....|::..|||:...::..|:::|...:...|.|||:|..|::..||
 Worm   491 TSLPWVLNSEFYPMWARSTCVSISTLSNWVFNLIIALTYLSLTHAITKYGAFWLYAIFTIIAFIF 555

  Fly   506 VYFAVPETKGKSLNEIQQELAGNRSTPQAIPAEK 539
            :||.||||.|.|::|::......|....|:.|.:
 Worm   556 IYFLVPETTGYSIDEVEMLFMNKRQRNIAMQARQ 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 112/482 (23%)
MFS 118..508 CDD:119392 122/515 (24%)
hmit-1.2NP_507624.1 MFS 32..562 CDD:421695 132/548 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157918
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 237 1.000 Inparanoid score I2130
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.800

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