DRSC/TRiP Functional Genomics Resources

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Protein Alignment nebu and R09B5.11

DIOPT Version :10

Sequence 1:NP_648605.1 Gene:nebu / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_503413.2 Gene:R09B5.11 / 178634 WormBaseID:WBGene00019979 Length:516 Species:Caenorhabditis elegans


Alignment Length:532 Identity:157/532 - (29%)
Similarity:244/532 - (45%) Gaps:79/532 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VKASDNGRTSSTPHDQENLLGNMVHTSTSNNSQ-----KWPQYV------AALAAAGGAFAAG-- 98
            |.||.|....|..:.:.....|:..:...|:.|     .|..::      .|||:....|..|  
 Worm     4 VVASQNKNDRSFSNMESESSSNVEKSEKENHHQSLPDENWTPFLFFCISSIALASFQDGFQIGCI 68

  Fly    99 -----TVLGWTSPAETEIVDRGE-------GYDFPVDKDQFSWVGSAMTLGAACVCIPIGFLINM 151
                 .::.|......|:.  ||       .:.:.|....|| ||.  ..|:.|    .|||.:.
 Worm    69 NAPGPLIIDWIKKCHFELF--GEVLSQYQADFIWSVAVSMFS-VGG--MFGSFC----SGFLADK 124

  Fly   152 IGRKWTMLFLVLPFILGWTMLIWAVNVS---------MLYASRFILGIAGGAFCVTAPMYTGEIA 207
            .|||.|:|:..:      ..|:.||.:|         |:...||::|:..|......||:..|:|
 Worm   125 FGRKSTLLYNNI------LALLAAVCLSTSKLFNFYPMIVFGRFLVGLNCGITSGLVPMFLTELA 183

  Fly   208 QKEIRGTLGSFFQLMITIGILFVYAVGA----GVKIFWLSII-CGILPLIFG-AIFFFMPESPTY 266
            ...:||..|||.||.|::.|:...|:|.    |.::.|..|. |..:|.... |...|..|||.|
 Worm   184 PANLRGKCGSFHQLNISVAIVLSQALGLPQIFGTQVGWPYIFACVAIPTFLQLATIPFCVESPKY 248

  Fly   267 LVSK--DRSENAIKSIQWLRGKEYDYEPELAELRETDRETKANKVNV-------WAALNRPVTRK 322
            |:||  || |.|.:.::.|||.....|    ||....:||   .|.|       :.:|.:...:.
 Worm   249 LISKLNDR-EEARRILEKLRGHTKVDE----ELEHMVQET---MVTVEPLHQPGYVSLFKGDNQW 305

  Fly   323 ALAISMGLMFFQQVCGINAVIFYASRIFLEAN-TGIEAEWATILIGIMQVVATFVSTLVVD--KL 384
            .:.:|:.:||.||..||:||.||::.||.... :|.|..:||:..|.::::|||....::|  |.
 Worm   306 PMIVSILMMFSQQFSGISAVTFYSTLIFKRNGLSGNEPMYATVGFGCIKLIATFGCLFLIDHPKF 370

  Fly   385 GRRILLLASGISMAISTTAIGVYFFLQKQDAAQVVSLGWLPVASLCLFIIMFSIGYGPVPWLMMG 449
            ||:.|.:|....|.||:..|.:...|..   |......::.|..:..|::.|:.|.||:||....
 Worm   371 GRKRLHIAGLSGMCISSILIVITLTLSN---AGYHWASYMNVLFILSFVVTFAFGPGPIPWFFTS 432

  Fly   450 ELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGTFWLFAGLTVVGVIFVYFAVPETK 514
            |||.:..:|.|.:::.||||:..::|..||:.:|:.:. ...|.:|...|....||.:..|||||
 Worm   433 ELFDSATRGRAAAVSATSNWVANWMVGLTFLPINNIIH-QYAFLMFTFFTFTFAIFTWKFVPETK 496

  Fly   515 GKSLNEIQQELA 526
            |||.:.|::|||
 Worm   497 GKSPSAIRKELA 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebuNP_648605.1 MFS_GLUT6_8_Class3_like 99..520 CDD:340916 139/454 (31%)
R09B5.11NP_503413.2 MFS_GLUT_Class1 49..498 CDD:340989 141/475 (30%)

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