DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10960 and F13B12.2

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_501925.2 Gene:F13B12.2 / 177935 WormBaseID:WBGene00008730 Length:512 Species:Caenorhabditis elegans


Alignment Length:439 Identity:100/439 - (22%)
Similarity:191/439 - (43%) Gaps:63/439 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 SAMTLGAACVCIPIGFLINMIGRKWTMLFLVLPFILGWTMLI----WAVNVSMLYASRFILGIAG 192
            |:..:||...|:.:. .|:..|.|..::.|....::..::|:    |..........|.:.|:..
 Worm    89 SSQGVGALIGCLIVS-PISKFGAKDVLMRLNNVILIAGSLLMFLSYWITFPIAFIVGRILTGVYT 152

  Fly   193 GAFCVTAPMYTGEIAQKEIRGTLGSFFQLMI----TIGILFVYAVGAGVKIFWLSIICGILPLIF 253
            |..|..||:|..:|..|.|:|::..|..:.:    ::|.:|......|.:..|..::  :||..|
 Worm   153 GLACAFAPLYLQQIIPKNIKGSMSCFLHIAVCFGSSLGAIFSLPFMFGSETTWPILV--VLPAGF 215

  Fly   254 GAIF----FFMPESPTYLVSKDRSENAIKSIQWLRG----------KEY-DYEPELAELRETDRE 303
            |.|.    :|:|::|..|:...|...||:||::...          ||| |..||:.|       
 Worm   216 GIIMLAASYFIPDTPNNLLQMGRYTEAIESIKFYYDIEDSDEDEIIKEYWDMVPEMPE------- 273

  Fly   304 TKANKVNVWAALNRPVTRKALAISMGLMFFQQVCGINAVIFYASRIFLEANTGIEAEWATILIGI 368
                ::::.:|.:....|:.:.:.|.:...|...|....|.|::.:| ||.:.|:     ||:..
 Worm   274 ----QLSLCSAFSNSSIRRGILLGMVVSATQIFSGSMVTISYSTEMF-EAVSFID-----ILVPF 328

  Fly   369 MQVVATFVSTLV-------VDKLGRRILLLASGISMAISTTAIGVYFFLQKQDAAQVVSLGWLPV 426
            :..:.:.:|.|:       |:..|||.|||.: :...|......:.|.|...|::...|.|:  .
 Worm   329 LPALGSILSILLTIPALRWVETRGRRPLLLKT-LMFCIIANVFLLIFTLISSDSSGWASWGF--A 390

  Fly   427 ASLCLFIIMFSIGYGPVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGT 491
            |:..::.|.:::|.|||.:.:..||...:....:...|...||:.....|..:..|:..:| |.:
 Worm   391 AAFFMYGIGYNLGVGPVAYFLPAELVPPEAASASLGAAVAVNWICTITTTLFYYPLSKTVG-GWS 454

  Fly   492 FWLFAGLTVVGVIFVYFAVPETKG---------KSLNEIQQELAGNRST 531
            :.:|...|.:..:.::..:||||.         :.|.::...:|.|..|
 Worm   455 YLIFIIPTSIFSMILWRLLPETKFHYKIDPLEIRLLTDLGPSIAPNYGT 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 86/371 (23%)
MFS 118..508 CDD:119392 92/405 (23%)
F13B12.2NP_501925.2 MFS_GLUT_Class1_2_like 34..479 CDD:340915 96/413 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.