DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10960 and hmit-1.3

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_497725.2 Gene:hmit-1.3 / 175458 WormBaseID:WBGene00010811 Length:604 Species:Caenorhabditis elegans


Alignment Length:602 Identity:153/602 - (25%)
Similarity:243/602 - (40%) Gaps:161/602 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 PVKIVKASDNGRTSSTPHDQENLLGNMVHTSTSNNSQKWPQYVAALAAAGGAFAAGTVLGWTSPA 107
            ||.....|...|.||.|                  ...|..|:.|.:|..|.|..|...|..|.|
 Worm     6 PVAAGAGSGQTRPSSDP------------------KTGWFVYMLAFSAVIGGFLFGYDTGIVSAA 52

  Fly   108 ETEIVDRGEGYDFPVDKDQFSW--VGSAMTLGAACV---CIPIGFLINMIGRKWTMLFLVLPFIL 167
            .. .|....|.. |:|.   .|  :..::|.|.|.:   |...|  .:.:|||..::...:.|.:
 Worm    53 ML-YVPNASGIK-PLDS---VWQEIIVSITPGVAAIGSLCSGPG--SDFLGRKKIIIGASVTFTI 110

  Fly   168 G-------WTMLIWAVNVSMLYASRFILGIAGGAFCVTAPMYTGEIAQKEIRGTLGSFFQLMITI 225
            |       ||.:|       |...|.:||:|.|...:..|:|..|.:...|||.|.:.||||||:
 Worm   111 GAIICAAAWTKII-------LLIGRILLGLAIGFASMIVPIYVSEASPSHIRGKLVTGFQLMITV 168

  Fly   226 GILFVYAVGAGV------KIFW-LSIICGILPLIFGAI-FFFMPESPTYLVSKDRSENAIKSI-- 280
            |::....:|...      ::.| |......:|.|...: |.|:||||.:|....|:..|.:.:  
 Worm   169 GLVIANIIGGAFSYVDPDQVGWRLMFAFAAVPAIIQFVCFLFLPESPRWLYEHGRTVEAREVLTR 233

  Fly   281 ------QWLRGKEYDYE-PELAELRETDRETKA----NKVNVWAALNRPVTRKALAISMGLMFFQ 334
                  :|:     ||| .|::...|.:...||    |...:...|..|..|||:.|...|..||
 Worm   234 IYNGHTEWV-----DYEINEISFSYEEELRAKAEHAGNGPTIIRILKTPHVRKAMIIGSLLQMFQ 293

  Fly   335 QVCGINAVIFYASRIFLEANTGIEAEWATILIGI----MQVVATFVSTLVVDKLGRRILLLASGI 395
            |:.|||.|::|...|...|  |::....||.|.:    :..:.||:...:|:::|||:|||.|.|
 Worm   294 QLSGINTVMYYTGNIIRSA--GVKDNHTTIWISVGTSAINFLGTFIPIALVERVGRRVLLLVSMI 356

  Fly   396 SMAISTTAIGVYFFLQKQDA------------------------------------------AQV 418
            .:.:...|:||.|.|...|:                                          ::|
 Worm   357 GVILFLIAMGVSFLLINNDSLRTFDQQNYTLNYNPSVKHAAKCLKYSNCDFCVTDENCGFCESKV 421

  Fly   419 VSLGW-------------------------------------------LPVASLCLFIIMFSIGY 440
            ...|:                                           ||:..:..:::.||.||
 Worm   422 AKKGYCLPFPSDDSSDYSATGICEFSNLTNNGTDFEWEDTYCHTKFTVLPIIIMVFYLLSFSAGY 486

  Fly   441 GPVPWLMMGELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGTFWLFAGLTVVGVIF 505
            .|:||::..|.:....:..|.|::...||:...:|:.||::|:......|||:::.|.|:|.::|
 Worm   487 APLPWVLNAEFYPLWARSTAVSVSTACNWIFNLIVSLTFLSLSQAATKYGTFFIYCGCTMVALVF 551

  Fly   506 VYFAVPETKGKSLNEIQ 522
            |:|.||||||.|::|::
 Worm   552 VFFFVPETKGYSIDEVE 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 114/478 (24%)
MFS 118..508 CDD:119392 125/511 (24%)
hmit-1.3NP_497725.2 MFS 34..558 CDD:421695 136/544 (25%)
MFS <190..>249 CDD:421695 17/63 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157919
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 237 1.000 Inparanoid score I2130
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.790

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