DRSC/TRiP Functional Genomics Resources

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Protein Alignment nebu and Tret1-1

DIOPT Version :10

Sequence 1:NP_648605.1 Gene:nebu / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:XP_061502365.1 Gene:Tret1-1 / 1276247 VectorBaseID:AGAMI1_009608 Length:807 Species:Anopheles gambiae


Alignment Length:232 Identity:47/232 - (20%)
Similarity:69/232 - (29%) Gaps:93/232 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 EVVKPPSIHKHTSQEKIKAKVH--------------VGGESNDPGYVTLAYLNDMKEWILKQNQD 440
            ||...|.:    :.||.:|||.              .|.|.|||                 |.|:
Mosquito    32 EVYNQPEV----TPEKERAKVRNYFVHEPYGPNTYSFGYEINDP-----------------QTQN 75

  Fly   441 LRNKIREDVKEIVVGPKSPAGGASNLRQSNR-LNTNSKGKTDASPPKKTGNTETRKRKRKQVEVH 504
                                   |..|:..| :|.:.:|....:.|  .|..|..|...|:...:
Mosquito    76 -----------------------SQFREEKRFVNGSIQGSYGYARP--DGRIEVTKYMAKEDGGY 115

  Fly   505 SLSSGSESAGDIEGEEDVQSTW----------KEDGNAPSSGTFDE-----------CDDYGGAL 548
            |.......|||    |.|:|.|          :...:|||:.|:|.           .|.....|
Mosquito   116 SAQIQIFKAGD----EKVKSVWPTERPDILVERSKSDAPSNITWDPKSHLNVTVSHVADHVAQQL 176

  Fly   549 KITQEGDVMQEESDFDHCSSNCTKMKESMMREIENLE 585
            |       .|...|.:|.......:|.:::..|:..|
Mosquito   177 K-------QQHGLDLNHIDVTKDVLKPAVLDVIQGKE 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebuNP_648605.1 MFS_GLUT6_8_Class3_like 99..520 CDD:340916 29/144 (20%)
Tret1-1XP_061502365.1 None

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