DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10960 and slc2a12

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:XP_031758281.1 Gene:slc2a12 / 100487147 XenbaseID:XB-GENE-1012136 Length:591 Species:Xenopus tropicalis


Alignment Length:558 Identity:141/558 - (25%)
Similarity:243/558 - (43%) Gaps:118/558 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 VAALAAAGGAFAAGTVLGWTSPAETEIVDRGEGYDFPVDKDQFSWVGSAMTLGAACVCIPIGFLI 149
            ::::.||......|..||..|.|..::....|     :...|...|.||:.:||....:..|.||
 Frog    40 LSSVIAAVSGLLVGYELGIISGALLQLQSLLE-----LTCQQQEIVVSALLIGAFVASLVGGSLI 99

  Fly   150 NMIGRKWTMLFLVLPFILGWTMLIWAVNVSMLYASRFILGIAGGAFCVTAPMYTGEIAQKEIRGT 214
            ::.||:.|::|..:..:....:.:..|:...|.|.|.::|::.....:...:|..||:.:..||.
 Frog   100 DLYGRRITIIFTSILLVFSNLLPVVIVSYGSLIAGRIVIGVSISLSAIATCVYIAEISPQHKRGM 164

  Fly   215 LGSFFQLMITIGILFVYAVG---AGVKIFWLSIICGILPL--IFGAIFFFMPESPTYLVSKDRSE 274
            |.|..:|||.:||||.|...   |.|...|..:...|:||  :.....:|:|:||.:|:.|...:
 Frog   165 LVSLNELMIVVGILFAYICNYLFASVSNGWKYMFGLIIPLAALQAIAMYFLPQSPRFLIMKGYDD 229

  Fly   275 NAIKSIQWLRGKEYDYEPELAELRETDR-ETKANKVNVWAALNRPVTRKALAISMGLMFFQQVCG 338
            .|.|.:|.||... :...||..::.:.: |.:...::::.  :|...|..|.|.:.|.||.|:.|
 Frog   230 AAGKVLQKLRATT-NISEELTAIKSSIKAEYQYRFLDLFC--SRDNMRVRLLIGLTLSFFVQITG 291

  Fly   339 INAVIFYASRIFLEANTGIEAEWATIL----IGIMQVVATFVSTLVVDKLGRRILLLASGISMAI 399
            ...::||||.:.  .:.|.::..|..|    ||:::||:|..:.:.|||:|.:..|......||:
 Frog   292 QPNILFYASTVL--KSVGFQSTEAASLASTGIGVIKVVSTIPAIIFVDKIGSKTFLCIGSAVMAV 354

  Fly   400 STTAIGV---------------------------------------------------------- 406
            |..::|:                                                          
 Frog   355 SLVSVGLVSLQLDVNFNNICKVHTMQNHSLQDSIIYGPLSLSKPNESLFEETSTLESTKASYLSP 419

  Fly   407 -------YFFLQKQDAAQVVS----------------LGWLPVASLCLFIIMFSIGYGPVPWLMM 448
                   :|..|:.|::..|:                :.||.:|||..|:..||||.||:.||:.
 Frog   420 LNGTKSWHFTTQEVDSSIGVTPKETKIKSQPDGIPEYMKWLCLASLLAFVAAFSIGLGPMAWLVQ 484

  Fly   449 GELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGTFWLFAGLTVVGVIFVYFAVPET 513
            .|:|...|||.|.::..:.||.:..:::.||:.|.:.:|:....:.:|.:::..::||...||.|
 Frog   485 SEIFPAGIKGRAFAITSSMNWGMNLLISLTFLTLTEIIGLPWMLFGYALMSIASLVFVIMFVPNT 549

  Fly   514 KGKSLNEIQQELAGNRS----------------TPQAI 535
            ||:.|.||..||| |||                ||.|:
 Frog   550 KGRPLEEISMELA-NRSYVCNAVCYSRRGKRKLTPMAL 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 109/447 (24%)
MFS 118..508 CDD:119392 116/480 (24%)
slc2a12XP_031758281.1 MFS_GLUT12_Class3 40..557 CDD:340993 130/526 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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