DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10960 and slc2a3b

DIOPT Version :9

Sequence 1:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster
Sequence 2:XP_002667169.2 Gene:slc2a3b / 100330897 ZFINID:ZDB-GENE-121031-5 Length:534 Species:Danio rerio


Alignment Length:442 Identity:133/442 - (30%)
Similarity:221/442 - (50%) Gaps:35/442 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 IVDRGEGYDFPVDKDQFSWVGSAMTLGAACVCIPIGFLINMI-GRKWTMLFLVLPFILGWTMLIW 174
            :|..||..|.......:|...:....|.....:.:|.|:|.: |||..:|..:|..|.|..|.:.
Zfish    53 LVRTGEPMDDYTVTTLWSVAVAIFNFGGMIGSLSVGALVNKLGGRKSMLLSNILALIGGGLMGLS 117

  Fly   175 AV--NVSMLYASRFILGIAGGAFCVTAPMYTGEIAQKEIRGTLGSFFQLMITIGILFVYAVG--- 234
            ::  :..:|...|.::|:..|......|||.||||...:||..|:..||.:.||||....:|   
Zfish   118 SICSSYELLIVGRLVIGVFCGLSTGLTPMYVGEIAPTALRGAFGTLHQLGVVIGILVAQILGLES 182

  Fly   235 -AGVKIFW-LSIICGILPLIFGAI-FFFMPESPTY-LVSKDRSENAIKSIQWLRGKEYDYEPELA 295
             .|.:..| |.:....||.:..:| ..|..|||.| |:|.::.:.|.:::..|||.. |.|.::.
Zfish   183 LLGSQTLWPLLLALTALPAVIQSIMLIFCLESPRYLLISLNKEDEARQALTSLRGHS-DVEDDIR 246

  Fly   296 ELR-ETDRETKANKVNVWAALNRPVTRKALAISMGLMFFQQVCGINAVIFYASRIFLEANTGI-E 358
            |:: |..:.:...:|::......|..|:.:.|::.|...||:.|||||::|::.||  .|.|| |
Zfish   247 EMKDEAMKMSMEKRVSIPELFRNPAYRQPIIIAIILQLSQQLSGINAVMYYSTEIF--RNAGITE 309

  Fly   359 AEWATILIGIMQVVATFVSTLVVDKLGRRILLL--ASGISMAISTTAIGVYFFLQKQDAAQVVSL 421
            ..:|||.:|::..|.|.||..:|::.|||.|.|  .:|::..:....|.:.....:.:.|:::..
Zfish   310 PVFATIGMGVVNTVFTVVSLFLVERAGRRTLHLIGLTGMTFCVLLVTISLKLVDSEIEKAKLLQN 374

  Fly   422 GW-----------------LPVASLCLFIIMFSIGYGPVPWLMMGELFATDIKGFAGSLAGTSNW 469
            |.                 |.:.::..|:..|.:|.||:||.::.||||...:..|.::||..||
Zfish   375 GTAIIDSASPSEGISTVKVLAILAVFGFVASFEMGPGPIPWFIVAELFAQGPRPAAMAVAGCCNW 439

  Fly   470 LLAFVVTKTFVNLNDGLGIGGTFWLFAGLTVVGVIFVYFAVPETKGKSLNEI 521
            ..:|:|...|..|:..:| ...|.:|..|.||.::|.||.||||||::..:|
Zfish   440 TASFLVGLLFPILSKKIG-AYVFIIFLILLVVFIVFTYFRVPETKGRTFEDI 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 110/387 (28%)
MFS 118..508 CDD:119392 121/420 (29%)
slc2a3bXP_002667169.2 Sugar_tr 19..494 CDD:278511 133/442 (30%)
MFS 66..479 CDD:119392 122/416 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576884
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.740

Return to query results.
Submit another query.