Sequence 1: | NP_648604.2 | Gene: | CG42588 / 39457 | FlyBaseID: | FBgn0260965 | Length: | 2730 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_010649.1 | Gene: | TFC6 / 851964 | SGDID: | S000002770 | Length: | 672 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 1050 | Identity: | 180/1050 - (17%) |
---|---|---|---|
Similarity: | 289/1050 - (27%) | Gaps: | 451/1050 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 1739 IVPPVSQPKPEKLHEQNRDESVRA--PKEQLDPTTSKNSRGKRQSRSIA---------------- 1785
Fly 1786 -ATNTPTTMLTTASEDPEAV--------EGDSVEVPIKRKASTRRGSVPRDTPISSVNASDESAV 1841
Fly 1842 LESVPKKGRRSNISSVPADTTIPKSSKSDSLNAIEIIPPICEEPKVVPSKRGRKRAAPSDIETGL 1906
Fly 1907 AKKLKTEESSETERVVDFNLR--LLLIRKRDQLDTDEVLTNDGKGQGPLQCGLCLVRSDKNNWQR 1969
Fly 1970 HIGEHYGVGWLVGETP-KNITRSGIMTMMKNYLQKNGGKLTCRLCNHQLGSYLGMMLHLEGCGNK 2033
Fly 2034 QRFQCEFCQRSYTKLSLPVHIRTCPKRIAPQVTEDPEDADGDCKETVFSNAGRAKRKSTIKAETK 2098
Fly 2099 LKK--IGEALTTQKSGEGASAKNDFDGDSSDYDLTKDKESSEEYDSEGVDSNEDSISSEGEGSLG 2161
Fly 2162 DNFSTSKQSKANRRGDIDRKRICNRPVNVGECQQKPLLSRYHHLEARATHKWNEFVQRNYEAGAL 2226
Fly 2227 FTQLVPSYSKIPEKNTDGMLPPKNTPSMRYSYGKVKNEDDWKQLAPFEGFNKEGEYVGYLGSSIK 2291
Fly 2292 KLEWVPLPPKAASQYLLCSVRSKMKTFARHK--------KLKDEDGLLMLLKCTAKNAGKSWTLR 2348
Fly 2349 PELHYCVHVPNGPIHSFSFLPSGGYDKSSNRLGVLAVANSLSSVHIY------ALPLELANDEID 2407
Fly 2408 ENADEKVVIQLDSLITLTLDINNPVQDQCTKICWSLSAGHSFLATGYSSGHFALWDIGEKDNLNC 2472
Fly 2473 FIRNNQTHFVP-----VNFLYIGERNVQYMDLHYDNNGPRWLAVGTSIRQFKIYDIANWSNPYIL 2532
Fly 2533 TQDTISSLYMANLTWSPICEALVVSSSHFFRTIAVS----PSGIQFEHRTLDGTLTTTREMHTNC 2593
Fly 2594 QQNHMVFVTDNGDLVFLDVRNLNCGPALLKSTVNSRAVSTTELHHL--GSSAPSATD-------- 2648
Fly 2649 --PIDPDEFVRDYGLQINPLVPEPHKRKSTYLSAKRRPQNIHSLAMTRFNCVRCNWNSPTHTWVA 2711
Fly 2712 MGAEHGMLRI 2721 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG42588 | NP_648604.2 | PHA03247 | <11..541 | CDD:223021 | |
WD40 repeat | 2363..2403 | CDD:293791 | 9/45 (20%) | ||
WD40 repeat | 2437..2477 | CDD:293791 | 6/39 (15%) | ||
WD40 repeat | 2484..2533 | CDD:293791 | 11/48 (23%) | ||
WD40 repeat | 2541..2588 | CDD:293791 | 12/50 (24%) | ||
TFC6 | NP_010649.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR15052 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |