Sequence 1: | NP_648604.2 | Gene: | CG42588 / 39457 | FlyBaseID: | FBgn0260965 | Length: | 2730 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006248126.1 | Gene: | Son / 304092 | RGDID: | 1309013 | Length: | 2479 | Species: | Rattus norvegicus |
Alignment Length: | 2617 | Identity: | 487/2617 - (18%) |
---|---|---|---|
Similarity: | 841/2617 - (32%) | Gaps: | 846/2617 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 SNQPKPGNPTSAPPPHATKTAAA----PPKRIIKKIQ------LDFN-----KLKEAGLDRQLAE 69
Fly 70 V---------LRKQKLDAKRVDAPSSTSLSTSAAAQSTPTAPESKLQSPQQ-------------- 111
Fly 112 ------QLRQPAPQPLVKRFMISEHIEKIVPIQPTPNPTDGDRSKQVKALLKNRILNKSLITNTQ 170
Fly 171 AQQ-------KPTTSKAA------------PKMPPPVCHETA-------------PRSGGI--SP 201
Fly 202 APAAS-SMSIAKADLTVRQKQPPLL-------LNLVNQLPKHRAMCVSSDSPL-VNPHGTVHQVS 257
Fly 258 PSPQRIPVQQTTNVFSQPYPPPEVP--IARAAPTVP-----------TQLHRS--------PTPP 301
Fly 302 ---LIVLEHKVLAPNEKI----------DLSG--------------------------------- 320
Fly 321 -LRLPNAPVEATNSPDSAATPNIQSKVIKGKVIMNANKFKVSREKLAEMAKEIRNQ---ADQVKQ 381
Fly 382 PQAMKTLNSKDVISTMDTHFTINT----ILQPKRTSPFSSPTLKGNIAPLYNPKPNKATDFSAGS 442
Fly 443 SIRSNP----LPVESTKQTIIESNESTEDKAIDFPTSVPTTPGNRYSSEPNQATSNSVELELVSN 503
Fly 504 LETEGVMAVANPIDFPVYIPSTPDP------------TTESSPLKSFNEPINYPEVNALGS---- 552
Fly 553 ----------STPVYI---PITSERGHLTAEVTTESNLVDLPEPENIPKDMNADLVQSVPLISKL 604
Fly 605 NREPNTEIGDMHSQADTSAVSQEQSSSSAATSPEHKIQSAVDFIAQLTAENPLDESSFMDLSPEE 669
Fly 670 QRLSALFGFGGCSFASSSVTQPEEEELPIGKIVKMDDMNILHATLD---ISSDSTNVLRISPNAV 731
Fly 732 KMQSSVTS------LSTPLVDLQVGDSALEDTNIHNNFPNPVDNTTAS---ELQNVKSSVTETSI 787
Fly 788 QEANDETTVITTLPKKCDEKSQVPLEEVKTASDP--------------------------EPLKE 826
Fly 827 VNPPVKRAP----IRSKKAKI-----NLVQR----TKRPSIQKPIEVKKAKLDFEEEDEQAMAID 878
Fly 879 HSLME---DRYGVPGIEVNDNSA---STSSDQINHNLSSVKNNPKVPADEKQCEEEISPVQDE-- 935
Fly 936 -----DSAKSQAHEDKDDESEISYQKEDKIQSKSSSERDL----------------TQLY----- 974
Fly 975 ---HPPKMP--KNKSTHKTSSQEDFEVPQPASSSSNVSLI----------------DVLSQNPPA 1018
Fly 1019 PQGEPQ----LPFRKDSQELNTSVDSSVDAKGIQNLIGHLTAEKVV----PQTKKLSPTSKTEEA 1075
Fly 1076 SKALPRKKLVKTRPVLSKRSTKVGQKNPSEKPVHFEFLHPVSANAGNRIPTSSTSDDDGSIFLGF 1140
Fly 1141 DDNEGKRSKTPVRSQRVKQMKINETDISDDATPDYDETEEEQPSIEIQQPVKNS---------AA 1196
Fly 1197 DSKFTFDRHQVVGAFSDDSDSSD-----------AGPSSPMDFGD-----------NMSIEDSRT 1239
Fly 1240 S----------EEDVTAWAKLVNENEKPFVDEVLSPSKSGTEATV----DCSRIDDPLKTDGE-- 1288
Fly 1289 ATSSHHSEITPFCASSESKCVTDEKQPVIKEKDSITLDRKSEKSRRMSTKSILMTTDEHVKDSST 1353
Fly 1354 TSKINEKRLTSSPLKTPGSSENTELRLLE---EGNASDKQNEHLISPEALTNQKNAKLKKNLEEV 1415
Fly 1416 SPEK--PVSSLRSR--------------GKRKSGSHNKKLD--------ESEKHSENISCAK--K 1454
Fly 1455 EEKATERDLEDGEQLTTVDSTEDTDSTRNPID----NITAENTAIRAKRKTRCIVSKDSKKEM-- 1513
Fly 1514 ----KDLKED--GVKSSKDDLPPTMDSSEKPEDQKLDDVPDVSVKSKGTRKSLRASLNNEVPAIQ 1572
Fly 1573 PE---------PVINTV--SSSENSTSKMED--VVTEPNDT-----KNK---------------- 1603
Fly 1604 -RHTRNKSPQIKGSPTIKHFESIESEAIKGSDVS----SKAESSIRPTRQRQSRYSKAKSEPKAL 1663
Fly 1664 ADSKSENVSDPSISTVTQDLGQAKYDSSEKPSGDVQLNPVKDSCNEQDACKDSNQAKDLPKSRKK 1728
Fly 1729 RQSQSGTSKIIVPPVSQPKPEKLHEQNRDESVRAPKEQLDPTTSKNSR----------GKRQSRS 1783
Fly 1784 IA-------------ATNTPTTMLTTASEDPEAVEGDSVEVPIKRK--ASTRRGSVPRD------ 1827
Fly 1828 ---TPISSVNASDESA-----------------VLESVPKKGRRSNI------------SSVPAD 1860
Fly 1861 TTIPKSSKSD-----------------------SLN--AIEIIPP-----ICEEPKVVPSKRGRK 1895
Fly 1896 RAA-------------------------------PSDIETGLAKKLKTEESSETERVVDFNLRLL 1929
Fly 1930 LIRKRDQLD---------------------TDEVLTNDG------KGQ----GPLQCGLCLVRSD 1963
Fly 1964 KNNWQRHIGEHYGVGWLVGETPKNI----TRSGIMTMMKNYLQKNGGKLTCRLCN----HQLGSY 2020
Fly 2021 LGMMLHLEGCGNKQRFQ 2037 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG42588 | NP_648604.2 | PHA03247 | <11..541 | CDD:223021 | 134/698 (19%) |
WD40 repeat | 2363..2403 | CDD:293791 | |||
WD40 repeat | 2437..2477 | CDD:293791 | |||
WD40 repeat | 2484..2533 | CDD:293791 | |||
WD40 repeat | 2541..2588 | CDD:293791 | |||
Son | XP_006248126.1 | Forkhead_N | 1014..1140 | CDD:254796 | 23/128 (18%) |
G-patch | 2325..2368 | CDD:279867 | 10/44 (23%) | ||
DSRM | 2392..2460 | CDD:214634 | 6/22 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |