DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42588 and gtf3c2

DIOPT Version :9

Sequence 1:NP_648604.2 Gene:CG42588 / 39457 FlyBaseID:FBgn0260965 Length:2730 Species:Drosophila melanogaster
Sequence 2:XP_031757794.1 Gene:gtf3c2 / 100497817 XenbaseID:XB-GENE-997570 Length:931 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42588NP_648604.2 PHA03247 <11..541 CDD:223021
WD40 repeat 2363..2403 CDD:293791
WD40 repeat 2437..2477 CDD:293791
WD40 repeat 2484..2533 CDD:293791
WD40 repeat 2541..2588 CDD:293791
gtf3c2XP_031757794.1 WD40 repeat 482..533 CDD:293791
WD40 <547..>659 CDD:421866
WD40 repeat 574..625 CDD:293791
WD40 repeat 631..664 CDD:293791
WD40 repeat 676..716 CDD:293791
WD40 repeat 724..754 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006002
OrthoInspector 1 1.000 - - oto105395
Panther 1 1.100 - - LDO PTHR15052
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.100

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