DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sf3a2 and PRP11

DIOPT Version :9

Sequence 1:NP_648603.1 Gene:Sf3a2 / 39456 FlyBaseID:FBgn0036314 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_010241.1 Gene:PRP11 / 851518 SGDID:S000002201 Length:266 Species:Saccharomyces cerevisiae


Alignment Length:261 Identity:75/261 - (28%)
Similarity:112/261 - (42%) Gaps:51/261 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDFQNRAGGKTGSGGVASWSETNRDRKERLRQLALE------TIDLNKD------PYFMKNHLGS 53
            |::....|.|.|.||:||.|:.|..|::.:..|..:      |....||      ||..|||.|.
Yeast     1 MNYLEGVGSKKGGGGIASESQFNLQRRKEVESLLSKGENVPYTFQDEKDDQVRSNPYIYKNHSGK 65

  Fly    54 YECKLCLTLHNNEGSYLAHTQGKKHQDNLARRAAKEAKEAPSSL---------LAPEKPRVEPKK 109
            ..||||.|:|.:..|...|..||||..|:.||.....|   |||         ...::..:|.|:
Yeast    66 LVCKLCNTMHMSWSSVERHLGGKKHGLNVLRRGISIEK---SSLGREGQTTHDFRQQQKIIEAKQ 127

  Fly   110 FVKIGR--PGYRVTKQRELSNGQQSLLFQVDY-PEITESIV---------PRHRFMSAYEQKIEP 162
            .:|...  |..::...:...||...|..||:| .|:.|:.|         |..|.:|..|.. :.
Yeast   128 SLKNNGTIPVCKIATVKNPKNGSVGLAIQVNYSSEVKENSVDSDDKAKVPPLIRIVSGLELS-DT 191

  Fly   163 PDRKWQYLLFAAEPYETIGFKVPSREVEKSE--------------GKFWTHWNRDTKQFFLQFAF 213
            ..:..::|:.|.||:|.|..::|..|:..||              .|..|.|:..:|.:::||.|
Yeast   192 KQKGKKFLVIAYEPFENIAIELPPNEILFSENNDMDNNNDGVDELNKKCTFWDAISKLYYVQFFF 256

  Fly   214 K 214
            |
Yeast   257 K 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sf3a2NP_648603.1 PRP11 1..214 CDD:227571 73/259 (28%)
ZnF_U1 52..85 CDD:197732 14/32 (44%)
SF3A2 129..207 CDD:293440 26/101 (26%)
PRP11NP_010241.1 PRP11 1..262 CDD:227571 75/261 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343316
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5246
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I1600
Isobase 1 0.950 - 0 Normalized mean entropy S781
OMA 1 1.010 - - QHG53497
OrthoFinder 1 1.000 - - FOG0004594
OrthoInspector 1 1.000 - - oto100176
orthoMCL 1 0.900 - - OOG6_102158
Panther 1 1.100 - - LDO PTHR23205
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1286
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.780

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