DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sf3a2 and sf3a2

DIOPT Version :10

Sequence 1:NP_648603.1 Gene:Sf3a2 / 39456 FlyBaseID:FBgn0036314 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_957337.1 Gene:sf3a2 / 394018 ZFINID:ZDB-GENE-040426-897 Length:278 Species:Danio rerio


Alignment Length:274 Identity:202/274 - (73%)
Similarity:223/274 - (81%) Gaps:21/274 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDFQNRAGGKTGSGGVASWSETNRDRKERLRQLALETIDLNKDPYFMKNHLGSYECKLCLTLHNN 65
            ||||:|||||||||||||.||:||||:||||||||||||:|||||||||||||||||||||||||
Zfish     1 MDFQHRAGGKTGSGGVASASESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNN 65

  Fly    66 EGSYLAHTQGKKHQDNLARRAAKEAKEAPSSLLAPEKPRVEPKKFVKIGRPGYRVTKQRELSNGQ 130
            ||||||||||||||.||||||||||||||:. .||||.:||.|||||||||||:|||||:...||
Zfish    66 EGSYLAHTQGKKHQSNLARRAAKEAKEAPAQ-PAPEKVKVEVKKFVKIGRPGYKVTKQRDPEIGQ 129

  Fly   131 QSLLFQVDYPEITESIVPRHRFMSAYEQKIEPPDRKWQYLLFAAEPYETIGFKVPSREVEKSEGK 195
            ||||||:|||||.|.|.|||||||||||:||||||:||||||||||||||.|||||||::|:|.:
Zfish   130 QSLLFQIDYPEIAEGIGPRHRFMSAYEQRIEPPDRRWQYLLFAAEPYETIAFKVPSREIDKAETR 194

  Fly   196 FWTHWNRDTKQFFLQFAFKFEPKILPPP--------PPNLHRALGP----PGGFPM-PGPPRPAM 247
            |||||||:||||||||.||.|..::.|.        ||:|...|||    ||..|: ||.|.|  
Zfish   195 FWTHWNRETKQFFLQFHFKMEKALVAPSGPPVGVKHPPSLITGLGPRDAMPGMPPLPPGAPVP-- 257

  Fly   248 HPMFNGVHPPPPML 261
             |..    |||.:|
Zfish   258 -PQM----PPPGVL 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sf3a2NP_648603.1 PRP11 1..214 CDD:227571 180/212 (85%)
sf3a2NP_957337.1 PRP11 1..216 CDD:227571 182/215 (85%)

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