DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg1 and AT3G61960

DIOPT Version :9

Sequence 1:NP_001163433.1 Gene:Atg1 / 39454 FlyBaseID:FBgn0260945 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_567122.1 Gene:AT3G61960 / 825369 AraportID:AT3G61960 Length:626 Species:Arabidopsis thaliana


Alignment Length:715 Identity:204/715 - (28%)
Similarity:304/715 - (42%) Gaps:185/715 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IVGEYEYSSKDMLGHGAFAVVYKGRHRKKHMPVAIKCITKK--GQLKTQNLLGKEIKILKELTEL 65
            :||:|....:  :|.|:||||:..:||...:.||:|.|.||  ......||| |||.|   |:.:
plant     6 LVGDYALGPR--IGSGSFAVVWLAKHRSSGLEVAVKEIDKKLLSPKVRDNLL-KEISI---LSTI 64

  Fly    66 HHENVVALLDCKESQDCVSLVMEYCNGGDLADYLSVKGTLSEDTVRLFLVQLAGAMKALYTKGIV 130
            .|.|::...:..|:.|.:.||:|||:|||||.|::..|.:.|...:.|:.|||..::.|..|..:
plant    65 DHPNIIRFYEAIETGDRIFLVLEYCSGGDLAGYINRHGKVPEAVAKHFMRQLALGLQVLQEKHFI 129

  Fly   131 HRDLKPQNILLSHNYGKTLPAPSKIT--LKIADFGFARFLNEGAMAATLCGSPMYMAPEVIMSLQ 193
            ||||||||:|||         ..::|  |||.||||||.|...:||.|.||||:|||||:|.:.:
plant   130 HRDLKPQNLLLS---------SKEVTPLLKIGDFGFARSLTPESMAETFCGSPLYMAPEIIRNQK 185

  Fly   194 YDSKADLWSLGTIVYQCLTGKAPFYAQTPNELKSYYEQNANLAPKIP----SGVSPDLRDLLLCL 254
            ||:||||||.|.|::|.:|||.||...  |.::.::....:...|.|    :.:.||..||...|
plant   186 YDAKADLWSAGAILFQLVTGKPPFDGN--NHIQLFHNIVRDTELKFPEDTRNEIHPDCVDLCRSL 248

  Fly   255 LRRNSKDRISYESFFVHRFLQGKKAAVSPGEPSQAANLRRRVSKSGVLPVDMPPLGGTPPAKAKS 319
            ||||..:|:::..||.|.||:         ||.|..:    |..||.         .|...|:..
plant   249 LRRNPIERLTFREFFNHMFLR---------EPRQIPD----VEHSGF---------STCTGKSLL 291

  Fly   320 PLQQQLEQELKLVKLAEQQQKEREEQEAQEDENTVSVVANPAICATITNVGVLCDSENNSGSCSS 384
            |..|......:....||...|......|..     |.::.|......|.       ::..|.|||
plant   292 PSAQPSTSTNRFKSSAENVHKHGSSSSASN-----SQISMPHTSFEKTR-------KDTEGQCSS 344

  Fly   385 HE----DS-----DDFVLVPKNLPEDQRQGLAQVQAQPASGGQRPQQQQNQSSPPRPSSLPISE- 439
            ::    ||     .::|||                       .||......||....:||..|. 
plant   345 NQSGVVDSLELIEREYVLV-----------------------NRPSASLEGSSDCFDTSLQDSGF 386

  Fly   440 PKPVPAPARRQVARPGPLTVATLGGQQIPRSQPIS-VKQPRPDQRKSSVSSDINSISPPAVQFAI 503
            |..:|        |...::.::|..|     :|:| |..|||    :|||..:..:.    :..|
plant   387 PNILP--------RNEKVSSSSLEAQ-----KPLSDVSGPRP----ASVSYLLTEVQ----RLTI 430

  Fly   504 GTPPTRMR------------SASGGSLSETPPPHAPS---------------TWQVSPGHSQSPL 541
            ..|||:::            ::..|:..:.....|.:               :|.:|.|.::.  
plant   431 VHPPTKLQLLHQYAQALTELASEMGNTGQVKESFAVTLVVLAVWRKALEICDSWMMSVGENEV-- 493

  Fly   542 RRSGNSSPVLPSAALTKLPTLGSPTMLVAPGS---LGSIGSAGSGSENNNQHHMLGPRAFTLPEL 603
                |..|.  :|..|.:|.|.||    ||..   .....:|.:.:||.:..         |.|.
plant   494 ----NPDPT--TAPETSIPDLNSP----APAKTWVTQEFVTALNQAENLSTQ---------LNET 539

  Fly   604 GATGGLHSLLDT--------GAGGGGEPHAFQAPELSEETLMDREHNETLSKLNFVLALTDCIQE 660
            .|...:...::|        |..||           :||.|.::|...||.| ..:|.|:..|:|
plant   540 SAATHMPDAMETIYERALAYGKSGG-----------AEEYLSNKESAATLYK-KAILLLSFIIEE 592

  Fly   661  660
            plant   593  592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg1NP_001163433.1 S_TKc 9..274 CDD:214567 112/272 (41%)
STKc_ULK1_2-like 15..273 CDD:271022 112/265 (42%)
DUF3543 638..844 CDD:288883 8/23 (35%)
AT3G61960NP_567122.1 S_TKc 10..268 CDD:214567 113/274 (41%)
STKc_ATG1_ULK_like 16..267 CDD:270911 112/265 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0595
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 226 1.000 Inparanoid score I1167
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24348
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1024
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.960

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