DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg1 and AT3G53930

DIOPT Version :9

Sequence 1:NP_001163433.1 Gene:Atg1 / 39454 FlyBaseID:FBgn0260945 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001078281.1 Gene:AT3G53930 / 824560 AraportID:AT3G53930 Length:712 Species:Arabidopsis thaliana


Alignment Length:545 Identity:164/545 - (30%)
Similarity:257/545 - (47%) Gaps:78/545 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IVGEYEYSSKDMLGHGAFAVVYKGRHRKKHMPVAIKCIT-KKGQLKTQNLLGKEIKILKELTELH 66
            ::|:|....:  :|.|:|:||::|||......||||.|. .:...|.|..|..||.||:   :::
plant    16 VIGDYAVGRQ--IGSGSFSVVWEGRHLVHGTVVAIKEIAMARLNKKLQESLMSEIIILR---KIN 75

  Fly    67 HENVVALLDCKESQDCVSLVMEYCNGGDLADYLSVKGTLSEDTVRLFLVQLAGAMKALYTKGIVH 131
            |.|::..:|..|:...::||:|||.||||:.|:...|::.|.|.:.|::|||..::.|....|:|
plant    76 HPNIIRFIDMIEAPGKINLVLEYCKGGDLSMYIHKHGSVPEATAKHFMLQLAAGLQVLRDNNIIH 140

  Fly   132 RDLKPQNILLSHNYGKTLPAPSKITLKIADFGFARFLNEGAMAATLCGSPMYMAPEVIMSLQYDS 196
            |||||||:|||.:       .:...||||||||||.|....:|.||||||:|||||::...:||:
plant   141 RDLKPQNLLLSTD-------DNDAALKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDA 198

  Fly   197 KADLWSLGTIVYQCLTGKAPFYAQTPNELKSYYEQNANL-APKIPSGVSPDLRDLLLCLLRRNSK 260
            ||||||:|.|::|.:||:.||...:..:|.....::..| .|.....:|.|.:||...|||||..
plant   199 KADLWSVGAILFQLVTGRTPFTGNSQIQLLQNIIRSTELHFPADCRDLSTDCKDLCQKLLRRNPV 263

  Fly   261 DRISYESFFVHRFLQGKKA----------------AVSPGEPSQAANLRRRVSKSGVLPVDMP-- 307
            :|:::|.||.|.||..|::                ..|...||:  |: ..:|:...||..:.  
plant   264 ERLTFEEFFHHPFLSDKQSYDFTRSRLDSRTMNDFHSSGSSPSR--NI-EEISQEDGLPFFLDDD 325

  Fly   308 ---PLGGTPPAKAKSPLQQQLEQELKLVKLAEQQQKEREEQEAQEDENTVSVVANPAICATITNV 369
               |.|.....|..||::......:             |.:||     .:|.:.|..:.:..:.|
plant   326 SSGPEGSPSSFKHTSPMKSSYGFSV-------------ERREA-----ALSPLKNMDLSSRYSRV 372

  Fly   370 GVLCDSENNSGSCSSHEDSDDFVLVPKNLPEDQ---RQGLAQVQAQPAS--------GGQRPQQQ 423
            .  ..:|.|:.....|..||.....|.:||:.:   .||  :|...|.|        .|......
plant   373 S--HRAETNNFKFEGHRLSDRSQFKPSSLPDSRSFSTQG--RVGDSPDSMDQDYVLISGPPVDIP 433

  Fly   424 QNQSSPPRPSSLPISEPKPVPAPARRQVAR-PGPLTVATLGGQQIPRSQPISVKQPRPDQRKSSV 487
            .:.|..|:|.:.|.....|.....:|.|.. ..|:.:|:..|..:.|...:..:...|.....|:
plant   434 SSSSGSPKPFNYPFKSHSPPVEFIKRNVTNLTAPMPIASATGNNLSRFGSLESQNCIPGTSHGSL 498

  Fly   488 SSDINSISPPAVQFAIGTPPTRMRS 512
            .. :::...|:....     ||:||
plant   499 DL-VDAFEQPSTNSL-----TRIRS 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg1NP_001163433.1 S_TKc 9..274 CDD:214567 109/266 (41%)
STKc_ULK1_2-like 15..273 CDD:271022 109/259 (42%)
DUF3543 638..844 CDD:288883
AT3G53930NP_001078281.1 STKc_ATG1_ULK_like 26..276 CDD:270911 109/259 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0595
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 226 1.000 Inparanoid score I1167
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24348
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1024
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.960

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