DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg1 and stk35

DIOPT Version :10

Sequence 1:NP_001163433.1 Gene:Atg1 / 39454 FlyBaseID:FBgn0260945 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001071084.1 Gene:stk35 / 568080 ZFINID:ZDB-GENE-061103-553 Length:406 Species:Danio rerio


Alignment Length:334 Identity:97/334 - (29%)
Similarity:138/334 - (41%) Gaps:95/334 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YSSKDMLGHGAFAVVYKGRHRKKHMPVAIKCITKKGQLKTQNLLGKEIKILKELTELHHENVVAL 73
            ||....:|.|::.|||:...|:....||||.:......|.:..|. |...|..| |..|||||.|
Zfish    71 YSLIREVGRGSYGVVYEAVARRSGARVAIKKLRCDAPEKVELALA-EFWALASL-EKRHENVVQL 133

  Fly    74 LDC---------------KESQDCVSL----------------------VMEYCNGGDLADYLSV 101
            .:|               |.::..:.|                      |||:|:||||..|:  
Zfish   134 EECVLQRNGMAQKMSHGNKRNKQYLRLVETSLKGERILGYPEEPCYLWFVMEFCDGGDLNQYI-- 196

  Fly   102 KGTLSE----DTVRLFLVQLAGAMKALYTKGIVHRDLKPQNILLSHNYGKTLPAPSKITLKIADF 162
               ||.    .|.|.|:.||..|:..|:...||||||||.|||:|...|..:       :|:|||
Zfish   197 ---LSRRPDPRTNRSFMKQLTSAVAFLHKNNIVHRDLKPDNILISQKSGNPV-------IKVADF 251

  Fly   163 GFAR-------FLNEG--------------AMAATLCGSPMYMAPEVIMSLQYDSKADLWSLGTI 206
            |.::       ..|||              ...::.|||..|||||| ....|.:|||:::||.|
Zfish   252 GLSKVCAGLSCMQNEGDDQVNNKNIVNINKFWLSSACGSDFYMAPEV-WEGHYTAKADIFALGII 315

  Fly   207 VYQCLTGKAPFYAQTPNE-LKSYYEQNANLAP-----------------KIPSGVSPDLRDLLLC 253
            ::..:.......|::..| |.:|..|...:.|                 |..|.:|..::.||..
Zfish   316 IWAMIERITFIDAESKRELLGTYVRQGTEIVPVGEALLENPKMVLHIPQKTRSIMSEGVKRLLQD 380

  Fly   254 LLRRNSKDR 262
            :|..|.:||
Zfish   381 MLAVNPQDR 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg1NP_001163433.1 STKc_ULK1_2-like 15..273 CDD:271022 95/328 (29%)
DUF3543 640..844 CDD:463451
stk35NP_001071084.1 Protein Kinases, catalytic domain 70..401 CDD:473864 97/334 (29%)
Blue background indicates that the domain is not in the aligned region.

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