DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg1 and si:ch211-63o20.7

DIOPT Version :9

Sequence 1:NP_001163433.1 Gene:Atg1 / 39454 FlyBaseID:FBgn0260945 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001038586.2 Gene:si:ch211-63o20.7 / 566836 ZFINID:ZDB-GENE-041001-194 Length:357 Species:Danio rerio


Alignment Length:347 Identity:97/347 - (27%)
Similarity:146/347 - (42%) Gaps:118/347 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YSSKDMLGHGAFAVVYKGRHRK------KHMPVAIK----CITKKGQLKTQNLLGKEIKILKELT 63
            |:.:..:|.|::.||:|||..:      |...||||    |..:..:|..|.|....|      |
Zfish     5 YTLQQEVGRGSYRVVFKGRVTETGWWGAKGDTVAIKRLPCCSPESIELYLQELWAMRI------T 63

  Fly    64 ELHHENVVALLDC--------------------------------KESQD--------------- 81
            ..:|.||:||.:|                                |:|:.               
Zfish    64 ARNHPNVIALYNCLLQTGPRTLQPLRSSRLPLDLVESALKGRVVDKDSKTQTRNASRSKRRLISK 128

  Fly    82 ------CVS--LVMEYCNGGDLADYLSVKGTLSE--DTVRLFLVQLAGAMKALYTKGIVHRDLKP 136
                  |.:  ||||||.||||..|:..:...:|  :||   :.|:..|:..|:..|||||||||
Zfish   129 EEVPRRCFALWLVMEYCEGGDLGQYILSRPPDAECNNTV---VRQICSAIAFLHEHGIVHRDLKP 190

  Fly   137 QNILLSHNYGKTLPAPSKITLKIADFGFARFLN---EG-----AMAATLCGSPMYMAPEVIMSLQ 193
            .|:|:.    .|...|   .:|:||||.:..|:   :|     |:::| |||..||||||.....
Zfish   191 DNVLVC----LTKEGP---VMKVADFGLSNMLDNPTDGVQSRLALSST-CGSDFYMAPEVWAGRS 247

  Fly   194 YDSKADLWSLGTIVYQCLTGKAPFYAQTPN--ELKSYYE-------------QNANL-------- 235
            |.::||::|||.:.:..|. :..|.....|  :|.:|..             :|.:|        
Zfish   248 YTAQADIFSLGVLFWAVLE-RITFLEDGTNQEQLGAYVMRGRWLSPLAEALCENPDLQLIIPMRT 311

  Fly   236 --APKIPSGVSPDLRDLLLCLL 255
              ||.:|...:|.:.:|||.:|
Zfish   312 RRAPPLPPPPNPSMCELLLDML 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg1NP_001163433.1 S_TKc 9..274 CDD:214567 97/347 (28%)
STKc_ULK1_2-like 15..273 CDD:271022 96/341 (28%)
DUF3543 638..844 CDD:288883
si:ch211-63o20.7NP_001038586.2 PKc_like 5..350 CDD:304357 97/347 (28%)
S_TKc 5..346 CDD:214567 97/347 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0595
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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