DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg1 and stk35l

DIOPT Version :9

Sequence 1:NP_001163433.1 Gene:Atg1 / 39454 FlyBaseID:FBgn0260945 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001008627.1 Gene:stk35l / 494084 ZFINID:ZDB-GENE-041212-52 Length:397 Species:Danio rerio


Alignment Length:336 Identity:101/336 - (30%)
Similarity:142/336 - (42%) Gaps:97/336 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YSSKDMLGHGAFAVVYKGRHRKKHMPVAIKCITKKGQLKTQNLLGKEIKILKELTELHHENVVAL 73
            ||....:|.|::.|||:...||....||:|.:........:..|. |...|..| |..|||||.|
Zfish    60 YSLLREVGRGSYGVVYEAIARKSGAKVAVKKLRCDAPENVELALA-EFWALTSL-EKRHENVVQL 122

  Fly    74 LDC---------------KESQDCVSL----------------------VMEYCNGGDLADYLSV 101
            .:|               |.|:..:.|                      |||:|.||||..::  
Zfish   123 EECVLQKNGMAQKMSHGNKRSKQYLRLVETSLKGERVLSCPDEPCYLWFVMEFCEGGDLNQFI-- 185

  Fly   102 KGTLSED----TVRLFLVQLAGAMKALYTKGIVHRDLKPQNILLSHNYGKTLPAPSKITLKIADF 162
               ||..    |...|::||:.|:..|:...||||||||.|||:|.:.|    ||   .||:|||
Zfish   186 ---LSRQPDPHTNASFMMQLSSAVAFLHQNNIVHRDLKPDNILISESSG----AP---VLKVADF 240

  Fly   163 GFARF---LNEGAMAA--------------------TLCGSPMYMAPEVIMSLQYDSKADLWSLG 204
            |.::.   |:.|...|                    :.|||..|||||| ....|.:|||:::||
Zfish   241 GLSKVCAGLSAGVRDAEEGLDKNRNGVVNINKFWLSSACGSDFYMAPEV-WEGHYTAKADIFALG 304

  Fly   205 TIVYQCLTGKAPFYAQTPNE-LKSYYEQNANLAP-------------KIP----SGVSPDLRDLL 251
            .|::..:.......|::..| |.:|..|.:::.|             .||    |.:|..||.||
Zfish   305 IIIWAMIERITFIDAESKRELLGTYVRQGSDIVPVGEALLENPKMVLSIPQRRRSHMSEALRKLL 369

  Fly   252 LCLLRRNSKDR 262
            ..:|..|.:||
Zfish   370 KDMLAVNPQDR 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg1NP_001163433.1 S_TKc 9..274 CDD:214567 101/336 (30%)
STKc_ULK1_2-like 15..273 CDD:271022 99/330 (30%)
DUF3543 638..844 CDD:288883
stk35lNP_001008627.1 PKc_like 59..392 CDD:304357 101/336 (30%)
S_TKc 60..388 CDD:214567 101/336 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0595
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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