DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg1 and Pdik1l

DIOPT Version :10

Sequence 1:NP_001163433.1 Gene:Atg1 / 39454 FlyBaseID:FBgn0260945 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001101454.1 Gene:Pdik1l / 313609 RGDID:1307476 Length:341 Species:Rattus norvegicus


Alignment Length:370 Identity:97/370 - (26%)
Similarity:154/370 - (41%) Gaps:99/370 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LGHGAFAVVYKGRHRKKHMPVAIKCITKKGQLKTQNLLGKEIKILKELTELHHENVVALLDCKES 79
            :|.|::.|||:...||....||:|.|........:..| :|...|..: :..|.||:.|.:|...
  Rat    14 VGRGSYGVVYEAVIRKTSARVAVKKIRCHAPENVELAL-REFWALSSI-KSQHPNVIHLEECILQ 76

  Fly    80 QDCV-------------------SL----------------VMEYCNGGDLADY-LSVKGTLSED 108
            :|.:                   ||                ||::|:|||:.:| ||.|.....:
  Rat    77 KDGMVQKMSHGSNSSLYLQLVETSLKGEIAFDPRSAYYLWFVMDFCDGGDMNEYLLSRKPNRKTN 141

  Fly   109 TVRLFLVQLAGAMKALYTKGIVHRDLKPQNILLSHNYGKTLPAPSKITLKIADFGFARFLNEG-- 171
            |  .|::||:.|:..|:...|:||||||.|||:|.:...|  :..:.|||:||||.::..:..  
  Rat   142 T--SFMLQLSSALAFLHKNQIIHRDLKPDNILISQSRLDT--SDLEPTLKVADFGLSKVCSASGQ 202

  Fly   172 ----------AMAATLCGSPMYMAPEVIMSLQYDSKADLWSLGTIVYQCLTGKAPFYAQTPNE-L 225
                      ...:|.||:..|||||| ....|.:|||:::||.|::..|........:|..| |
  Rat   203 NPEEPVSVNKCFLSTACGTDFYMAPEV-WEGHYTAKADIFALGIIIWAMLERITFIDTETKKELL 266

  Fly   226 KSYYEQNANLAPKIPSGVSPDLRDLLLCLLRRNSKDRISYESFFVHRFLQGKKAAVSPGEPSQAA 290
            .||.:|...:.|...:.:.....:||:.:.:::...|:..   .:...|              ||
  Rat   267 GSYVKQGTEIVPVGEALLENPKMELLIPVKKKSMNGRMKQ---LIKEML--------------AA 314

  Fly   291 NLRRRVSKSGVLPVDMPPLGGTPPAKAKSPLQQQLEQELKLVKLA 335
            |           |.|.|               ...|.||:||::|
  Rat   315 N-----------PQDRP---------------DAFELELRLVQIA 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg1NP_001163433.1 STKc_ULK1_2-like 15..273 CDD:271022 84/306 (27%)
DUF3543 640..844 CDD:463451
Pdik1lNP_001101454.1 STKc_PDIK1L 7..331 CDD:270879 95/366 (26%)
Blue background indicates that the domain is not in the aligned region.

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