DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atg1 and Ulk1

DIOPT Version :9

Sequence 1:NP_001163433.1 Gene:Atg1 / 39454 FlyBaseID:FBgn0260945 Length:855 Species:Drosophila melanogaster
Sequence 2:XP_011247721.1 Gene:Ulk1 / 22241 MGIID:1270126 Length:1079 Species:Mus musculus


Alignment Length:1127 Identity:371/1127 - (32%)
Similarity:487/1127 - (43%) Gaps:352/1127 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VGEYEYSSKDMLGHGAFAVVYKGRHRK----------------------KH-MPVAIKCITKKGQ 45
            ||::|:|.||::||||||||:|||||:                      || :.||:|||.||..
Mouse    11 VGKFEFSRKDLIGHGAFAVVFKGRHREVGEAPAEASQSRTPSPRDTLPPKHDLEVAVKCINKKNL 75

  Fly    46 LKTQNLLGKEIKILKELTELHHENVVALLDCKESQDCVSLVMEYCNGGDLADYLSVKGTLSEDTV 110
            .|:|.||||||||||   ||.|||:|||.|.:|..:.|.|||||||||||||||....|||||||
Mouse    76 AKSQTLLGKEIKILK---ELKHENIVALYDFQEMANSVYLVMEYCNGGDLADYLHTMRTLSEDTV 137

  Fly   111 RLFLVQLAGAMKALYTKGIVHRDLKPQNILLSHNYGKTLPAPSKITLKIADFGFARFLNEGAMAA 175
            ||||.|:||||:.|::|||:|||||||||||| |.|.....||.|.:|||||||||:|....|||
Mouse   138 RLFLQQIAGAMRLLHSKGIIHRDLKPQNILLS-NPGGRRANPSNIRVKIADFGFARYLQSNMMAA 201

  Fly   176 TLCGSPMYMAPEVIMSLQYDSKADLWSLGTIVYQCLTGKAPFYAQTPNELKSYYEQNANLAPKIP 240
            ||||||||||||||||..||.||||||:||||||||||||||.|.:|.:|:.:||:|..|.|.||
Mouse   202 TLCGSPMYMAPEVIMSQHYDGKADLWSIGTIVYQCLTGKAPFQASSPQDLRLFYEKNKTLVPAIP 266

  Fly   241 SGVSPDLRDLLLCLLRRNSKDRISYESFFVHRFLQGKKAAVSPGEPSQAANLRRRVSKSGVLPVD 305
            ...|..||.|||.||:||.|||:.::.||.|.||.    |.:|            :.||..:||.
Mouse   267 RETSAPLRQLLLALLQRNHKDRMDFDEFFHHPFLD----ASTP------------IKKSPPVPVP 315

  Fly   306 MPPLGGTPPAKAKSPLQQQLEQELKLVKLAEQQQKEREEQEAQEDENTVSVVANPAICATITNVG 370
            ..|..|:..:.:.|.........    .|.|..|.::             .:.:||..|     |
Mouse   316 SYPSSGSGSSSSSSSASHLASPP----SLGEMPQLQK-------------TLTSPADAA-----G 358

  Fly   371 VLCDSENNSGSCSSHEDSDDFVLVPKNLPEDQRQGLAQVQAQP----------------ASGGQR 419
            .|..|.::.||.....|:||||:||...|.|.....|..:..|                .|.|:.
Mouse   359 FLQGSRDSGGSSKDSCDTDDFVMVPAQFPGDLVAEAASAKPPPDSLLCSGSSLVASAGLESHGRT 423

  Fly   420 PQQQQNQSSPPRPSSLP---------ISEPKPVP--------------APARRQVAR-------- 453
            |......||.|.||..|         .|.|.|||              :|.::|.||        
Mouse   424 PSPSPTCSSSPSPSGRPGPFSSNRYGASVPIPVPTQVHNYQRIEQNLQSPTQQQTARSSAIRRSG 488

  Fly   454 ------------------------------------PGP-----LTVATL----GGQQIPRSQPI 473
                                                |.|     |.|.|:    ...::|..|..
Mouse   489 STSPLGFGRASPSPPSHTDGAMLARKLSLGGGRPYTPSPQATLFLPVGTIPERPSWSRVPSPQGA 553

  Fly   474 SVKQPRPDQRKSSVS-------------------SDINSISP----------------------- 496
            .|:..|..:..|||.                   ||.:.:.|                       
Mouse   554 DVRVGRSPRPGSSVPEHSPRTTGLGCRLHSAPNLSDFHVVRPKLPKPPTDPLGATFSPPQTSAPQ 618

  Fly   497 --PAVQFA---IGTP-----------------PTRM-------RSASGGSLSE---------TPP 523
              |.:|..   .|:|                 ||:.       ::.|..:|..         |||
Mouse   619 PCPGLQSCRPLRGSPKLPDFLQRSPLPPILGSPTKAGPSFDFPKTPSSQNLLTLLARQGVVMTPP 683

  Fly   524 PH--APSTWQVSPGHSQ-------------SPLRRSGNSS------------------------- 548
            .:  .|...:.||.|.|             .|..||.::|                         
Mouse   684 RNRTLPDLSEASPFHGQQLGSGLRPAEDTRGPFGRSFSTSRITDLLLKAAFGTQASDSGSTDSLQ 748

  Fly   549 ----PVLPSA--------------ALTKLP---TLGSP-----------TMLVAPGSLGSIGSAG 581
                .:.|||              |.:..|   |:|||           |.:.:.||..|:||.|
Mouse   749 EKPMEIAPSAGFGGTLHPGARGGGASSPAPVVFTVGSPPSGATPPQSTRTRMFSVGSSSSLGSTG 813

  Fly   582 SGSENNNQHHMLGPRAFTLPELGATGGLHSLLDTGAGGGGEPHAFQAPELSEETLMDREHNETLS 646
            |.|    ..|::.......|||.|.|...||.|..|........|:||:|.|||||::||.|||.
Mouse   814 SSS----ARHLVPGACGEAPELSAPGHCCSLADPLAANLEGAVTFEAPDLPEETLMEQEHTETLH 874

  Fly   647 KLNFVLALTDCIQEVADSRCAPLSTFMVAGSQSAAQAA---------SADAQQIPPHAPEHCKRA 702
            .|.|.||....:.|:|            |...||::||         |..|.||...:.| ...|
Mouse   875 SLRFTLAFAQQVLEIA------------ALKGSASEAAGGPEYQLQESVVADQISQLSRE-WGFA 926

  Fly   703 ERLVLLVRGLQLLSSGMNLASQQLSNGQLKPSSNVKNALLTMNAKYRSMLFESKRLNGSGLLQKA 767
            |:|||.::..:|||||:..|..|:..|:|..||.||..:..:|..|::.:     ::..||..:.
Mouse   927 EQLVLYLKVAELLSSGLQTAIDQIRAGKLCLSSTVKQVVRRLNELYKASV-----VSCQGLSLRL 986

  Fly   768 NAF------------NITADKILYDYALDMCQAAALDELLKNTKNCFERYNTAHILLHSLVQKCN 820
            ..|            .:||::::..:|:.|.|:|||||:.::.:.|..||:.|.:||..|.....
Mouse   987 QRFFLDKQRLLDGIHGVTAERLILSHAVQMVQSAALDEMFQHREGCVPRYHKALLLLEGLQHTLT 1051

  Fly   821 HPQDKMMLNKYRDAVEKRLSIL 842
            ...|...:.|.:..:|:|||.|
Mouse  1052 DQADIENIAKCKLCIERRLSAL 1073

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg1NP_001163433.1 S_TKc 9..274 CDD:214567 177/287 (62%)
STKc_ULK1_2-like 15..273 CDD:271022 174/280 (62%)
DUF3543 638..844 CDD:288883 68/226 (30%)
Ulk1XP_011247721.1 PKc_like 13..301 CDD:389743 179/291 (62%)
DUF3543 866..1073 CDD:371876 67/224 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834626
Domainoid 1 1.000 347 1.000 Domainoid score I1031
eggNOG 1 0.900 - - E1_KOG0595
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 487 1.000 Inparanoid score I1410
Isobase 1 0.950 - 0 Normalized mean entropy S3689
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002616
OrthoInspector 1 1.000 - - otm44246
orthoMCL 1 0.900 - - OOG6_104561
Panther 1 1.100 - - O PTHR24348
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5656
SonicParanoid 1 1.000 - - X1024
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.730

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