DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atg1 and ulk1a

DIOPT Version :9

Sequence 1:NP_001163433.1 Gene:Atg1 / 39454 FlyBaseID:FBgn0260945 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001124103.1 Gene:ulk1a / 100170793 ZFINID:ZDB-GENE-080723-31 Length:927 Species:Danio rerio


Alignment Length:1005 Identity:349/1005 - (34%)
Similarity:472/1005 - (46%) Gaps:235/1005 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNIVGEYEYSSKDMLGHGAFAVVYKGRHRKKH-MPVAIKCITKKGQLKTQNLLGKEIKILKELTE 64
            |..:|:||::.||::||||||||:||||::|| ..||:|||.:|...|:|:||||||||||   |
Zfish     1 MESIGKYEFNRKDLIGHGAFAVVFKGRHKQKHNFEVAVKCINRKNLAKSQSLLGKEIKILK---E 62

  Fly    65 LHHENVVALLDCKESQDCVSLVMEYCNGGDLADYLSVKGTLSEDTVRLFLVQLAGAMKALYTKGI 129
            |.|||:|:|||.:|...||.||||||||||||:||..||.|||||:|:.|.||||||..|.:|||
Zfish    63 LKHENIVSLLDFQEISGCVYLVMEYCNGGDLAEYLHSKGCLSEDTIRVLLQQLAGAMSVLRSKGI 127

  Fly   130 VHRDLKPQNILLSHNYGKTLPAPSKITLKIADFGFARFLNEGAMAATLCGSPMYMAPEVIMSLQY 194
            :||||||||||||::.|:. ..|:.|.:|:|||||||:|....|||||||||||||||||||..|
Zfish   128 IHRDLKPQNILLSYSTGRK-SNPNNICIKLADFGFARYLQGNTMAATLCGSPMYMAPEVIMSHNY 191

  Fly   195 DSKADLWSLGTIVYQCLTGKAPFYAQTPNELKSYYEQNANLAPKIPSGVSPDLRDLLLCLLRRNS 259
            |:||||||:|||:||||||||||.|.||.||:.:||:|.:|:|.||...|..||.|||.||:||.
Zfish   192 DAKADLWSVGTIIYQCLTGKAPFQASTPQELRQFYERNRSLSPSIPRETSSHLRHLLLGLLQRNQ 256

  Fly   260 KDRISYESFFVHRFLQGKKAAVSPGEPSQAANLRRRVSKSGVLPVDMP----PLGGTPPAKAKS- 319
            ::||.::.||.|.||:...:                :.||..:||.:|    |..|:....:.| 
Zfish   257 RERIDFDDFFHHPFLEASTS----------------MKKSSPVPVPVPVPTYPSSGSGSFSSGSS 305

  Fly   320 -----PLQQQLEQELKLVKLAEQQQKEREEQEAQEDENTVSVVANPAICATITNVGVLCDSENNS 379
                 |.|...|....|                            |.:..|.:...:|.|     
Zfish   306 TSRLTPTQSDTEAPKSL----------------------------PQMKPTESPGSLLKD----- 337

  Fly   380 GSCSSHEDSDDFVLVPKNLPEDQRQGLAQVQAQPA----------SGG----------QRPQQQQ 424
               ||..||||||:||           ||..::|.          ||.          |.|....
Zfish   338 ---SSSSDSDDFVMVP-----------AQFTSEPVGAEGQDSLMRSGSSLLGATACLCQTPSSSP 388

  Fly   425 NQSSPPRP--------SSLPISEPKPVP--------------------APARRQVARPGPLTVAT 461
            :..:.|||        ||...|.|.|||                    |.|....:...|....|
Zfish   389 SGRTSPRPSRHLESCGSSYAQSIPVPVPTQKHNYQRMEHNLQESERTSASAHHCCSDGSPACGRT 453

  Fly   462 -----LGGQQ--IPRSQ----PISVKQPRP----------DQRKSSVS---SDINSISPPAVQ-- 500
                 .||.:  :|..|    |.:..||.|          ||:...||   :|:..:.|...|  
Zfish   454 GVSPDSGGSRSYLPSPQVGSIPETPSQPEPVGSRTGFHATDQQPGQVSPLFTDLTDLDPTLAQRL 518

  Fly   501 ----FAIGTPPTRMRSASGGSLSETP-------------------------PPHAPSTWQVSPGH 536
                .::.|...|.......|..:||                         |...|....|.|..
Zfish   519 RAHRHSLDTIVHRWDLCRRPSFGQTPNAALLQRGLTTRTKTMCDLKDLAQYPAAGPRVPLVRPAE 583

  Fly   537 SQSPLRRS---GNSSPVLPSAALTKLPTLGS--------PTMLVAP-----------GSLGSIGS 579
            .:..::||   |..|..|..|........||        |....||           |.:..:|:
Zfish   584 RRDTVKRSVSTGRLSDKLLKAVFGHQLDRGSCESLNSEKPMDTTAPPCGVDRSDSPAGVMFMLGT 648

  Fly   580 AGSGSENNNQHH---MLGPRAFTLPELGATGG-----LHSLLDTGAGGGGEPHAFQAPELSEETL 636
            ...|....:..|   .:|....|.|  |.|.|     |:...|..|....|...|..|||.||||
Zfish   649 PEYGHTPPHARHRRFSVGAPCSTSP--GWTYGSPESLLYGYTDAMATNLHENVTFVPPELPEETL 711

  Fly   637 MDREHNETLSKLNFVLALTDCIQEVADSRCAPLSTFMVAGSQSAAQAASADAQQIPPHAPEHCKR 701
            |:..|.:.||:|.||||.:.||.|:|:::  .:.|.......::....|..|.||...:.| ...
Zfish   712 MEEGHTDLLSQLRFVLAFSHCITELAETK--DIGTGRNVPPNASLLEQSVVADQISLLSRE-WSS 773

  Fly   702 AERLVLLVRGLQLLSSGMNLASQQLSNGQLKPSSNVKNALLTMNAKYRSML-------------F 753
            ||:|||.::..:||||.::.|...:..|:|.||.:||..:..:|..|:..:             |
Zfish   774 AEQLVLYMKCAELLSSALHTAMAGIKEGKLYPSGSVKQVVRELNEMYKECVNSCRSLTEKLQHFF 838

  Fly   754 ESKRLNGSGLLQKANAFNITADKILYDYALDMCQAAALDELLKNTKNCFERYNTAHILLHSLVQK 818
            .||:    .|:.:.|  :|||::::|.:.:.|.|.|||||:..:.::..|||:.|.:|:..|...
Zfish   839 SSKQ----RLMDRMN--SITAERLIYAHTVQMVQTAALDEMFHHGESSLERYHKALLLMEGLSLI 897

  Fly   819 CNHPQDKMMLNKYRDAVEKRLSILQQHGYI 848
            ...|.|...:||.:..:|:||..||..|.:
Zfish   898 ITEPSDLNNVNKCKRCIERRLCSLQAQGCV 927

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg1NP_001163433.1 S_TKc 9..274 CDD:214567 170/265 (64%)
STKc_ULK1_2-like 15..273 CDD:271022 168/258 (65%)
DUF3543 638..844 CDD:288883 66/218 (30%)
ulk1aNP_001124103.1 STKc_ULK1 6..272 CDD:271104 173/269 (64%)
S_TKc 9..271 CDD:214567 170/265 (64%)
DUF3543 713..924 CDD:288883 67/219 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577623
Domainoid 1 1.000 344 1.000 Domainoid score I1031
eggNOG 1 0.900 - - E1_KOG0595
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 474 1.000 Inparanoid score I1458
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1084750at2759
OrthoFinder 1 1.000 - - FOG0002616
OrthoInspector 1 1.000 - - otm24383
orthoMCL 1 0.900 - - OOG6_104561
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1024
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.700

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