Sequence 1: | NP_001163434.1 | Gene: | CG42709 / 39453 | FlyBaseID: | FBgn0261674 | Length: | 458 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001072366.1 | Gene: | lgi1 / 779819 | XenbaseID: | XB-GENE-954918 | Length: | 547 | Species: | Xenopus tropicalis |
Alignment Length: | 293 | Identity: | 63/293 - (21%) |
---|---|---|---|
Similarity: | 100/293 - (34%) | Gaps: | 86/293 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 93 CPRNCLCLEDFKFVQCANA-------------------HLTHVP----LDMPKTAAIIDLSHNVI 134
Fly 135 AELRPEDFANLSRAVEINLNHNLISSIDKDVFQGSERLKRLRLANNRLTKIDPDTFAAAKELTLL 199
Fly 200 DLSNNTITQRLDGSFLNQPDLVEFSCVNC------SWTELPEQTFQNM--------SGLEVLRLN 250
Fly 251 KNDFKQQINTKAFSPLTKIIKLKLPELEQQNIEELCSLLTSIDTISFLNYDISCYEFVLGTPFNG 315
Fly 316 SLIY----PTEPPLKGITNPPIVASITSTAKPV 344 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG42709 | NP_001163434.1 | LRR_8 | 126..182 | CDD:290566 | 15/55 (27%) |
leucine-rich repeat | 128..147 | CDD:275380 | 3/18 (17%) | ||
leucine-rich repeat | 148..171 | CDD:275380 | 6/22 (27%) | ||
LRR_RI | <150..225 | CDD:238064 | 21/74 (28%) | ||
LRR_8 | 171..254 | CDD:290566 | 21/96 (22%) | ||
leucine-rich repeat | 172..195 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 196..219 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 220..243 | CDD:275380 | 5/36 (14%) | ||
leucine-rich repeat | 244..268 | CDD:275380 | 5/23 (22%) | ||
lgi1 | NP_001072366.1 | leucine-rich repeat | 66..87 | CDD:275378 | 3/20 (15%) |
LRR_8 | 87..146 | CDD:338972 | 15/59 (25%) | ||
leucine-rich repeat | 88..111 | CDD:275378 | 3/23 (13%) | ||
leucine-rich repeat | 112..135 | CDD:275378 | 6/22 (27%) | ||
leucine-rich repeat | 136..159 | CDD:275378 | 9/22 (41%) | ||
PCC | 141..>216 | CDD:188093 | 21/94 (22%) | ||
leucine-rich repeat | 160..172 | CDD:275378 | 6/28 (21%) | ||
EPTP | 221..260 | CDD:367630 | 12/58 (21%) | ||
EPTP | 267..305 | CDD:367630 | 5/20 (25%) | ||
EPTP | 313..357 | CDD:367630 | |||
EPTP | 362..402 | CDD:367630 | |||
EPTP | 409..449 | CDD:367630 | |||
EPTP | 455..494 | CDD:367630 | |||
EPTP | 501..540 | CDD:367630 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |