DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42709 and Cpn2

DIOPT Version :9

Sequence 1:NP_001163434.1 Gene:CG42709 / 39453 FlyBaseID:FBgn0261674 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_082180.2 Gene:Cpn2 / 71756 MGIID:1919006 Length:547 Species:Mus musculus


Alignment Length:382 Identity:86/382 - (22%)
Similarity:149/382 - (39%) Gaps:88/382 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 LEPSCPRNCLCLEDFKFVQCANAHLTHVPLDMP----------------KTAAI--------IDL 129
            |...||..|.|..  :.|.|::..|..:|.|:|                :|.|.        :..
Mouse    18 LTQPCPVGCDCFG--REVFCSDEQLADIPPDIPPHITDIVFVETAFTTVRTRAFSGSPNLTKVVF 80

  Fly   130 SHNVIAELRPEDFANLSRAVEINLNHNLISSIDKDVFQGSERLKRLRLANNRLTKIDPDTFAAAK 194
            .:..:..|.|:.|..|.|..::.:..:.:|::...:|.....|::|.|..:||..:..|.|....
Mouse    81 LNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLFCHMD 145

  Fly   195 ELTLLDLSNN---TITQRLDGSFLNQPDLVEFSCVNCSWTELPEQTFQNMSGLEVLRLNKNDFKQ 256
            .|..|.|..|   |:..||   |.:..||...:......|:||:..||:::||::|:|: |:...
Mouse   146 ILESLQLQGNQLRTLPGRL---FQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLS-NNMLA 206

  Fly   257 QINTKAFSPLTKIIKLKL---------PELEQQ--NIEEL-------C----SLLTSIDTISFLN 299
            ::...|...|:.:.:|.|         |.|..|  ::|.|       |    ||.:|:..::|| 
Mouse   207 RLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFL- 270

  Fly   300 YDISCYEFVLGTPFNG-----------SLIYP--TEPPLKGITNPPIVASITSTAKPVTATPAPP 351
               |..:..|.|...|           ||.|.  ...|....||...:.|:|.:...:|..|   
Mouse   271 ---SLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLP--- 329

  Fly   352 RSANRNRGKMDNSTELVKAGILSSETSTSGVSVEPPAESQTNQVQ---ISQEAINTL 405
                  .....|..:|||..:.|:..:    ::.|......:::|   :|:..:.||
Mouse   330 ------EHVFRNLEQLVKLSLDSNNLT----ALHPALFHNLSRLQLLNLSRNQLTTL 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42709NP_001163434.1 LRR_8 126..182 CDD:290566 10/63 (16%)
leucine-rich repeat 128..147 CDD:275380 4/18 (22%)
leucine-rich repeat 148..171 CDD:275380 2/22 (9%)
LRR_RI <150..225 CDD:238064 19/77 (25%)
LRR_8 171..254 CDD:290566 27/85 (32%)
leucine-rich repeat 172..195 CDD:275380 7/22 (32%)
leucine-rich repeat 196..219 CDD:275380 8/25 (32%)
leucine-rich repeat 220..243 CDD:275380 6/22 (27%)
leucine-rich repeat 244..268 CDD:275380 6/23 (26%)
Cpn2NP_082180.2 LRRNT 21..52 CDD:214470 10/32 (31%)
LRR_8 73..133 CDD:290566 10/59 (17%)
leucine-rich repeat 75..98 CDD:275380 4/22 (18%)
LRR 1 98..119 3/20 (15%)
leucine-rich repeat 99..122 CDD:275380 2/22 (9%)
LRR_8 121..181 CDD:290566 17/62 (27%)
LRR 2 122..143 7/20 (35%)
leucine-rich repeat 123..146 CDD:275380 7/22 (32%)
LRR 3 146..167 8/23 (35%)
leucine-rich repeat 147..170 CDD:275380 8/25 (32%)
LRR_RI 149..374 CDD:238064 56/245 (23%)
LRR 4 170..191 6/20 (30%)
LRR_8 171..229 CDD:290566 15/58 (26%)
leucine-rich repeat 171..194 CDD:275380 6/22 (27%)
LRR 5 194..215 6/21 (29%)
leucine-rich repeat 195..218 CDD:275380 6/23 (26%)
LRR_8 217..277 CDD:290566 14/63 (22%)
LRR 6 218..239 4/20 (20%)
leucine-rich repeat 219..242 CDD:275380 5/22 (23%)
LRR 7 242..263 5/20 (25%)
leucine-rich repeat 243..266 CDD:275380 6/22 (27%)
LRR_8 266..325 CDD:290566 14/62 (23%)
LRR 8 266..287 6/24 (25%)
leucine-rich repeat 267..290 CDD:275380 6/26 (23%)
LRR 9 290..311 4/20 (20%)
leucine-rich repeat 291..314 CDD:275380 6/22 (27%)
LRR_8 313..373 CDD:290566 12/72 (17%)
LRR 10 314..335 4/29 (14%)
leucine-rich repeat 315..338 CDD:275380 5/31 (16%)
LRR 11 338..359 5/24 (21%)
leucine-rich repeat 339..360 CDD:275380 5/24 (21%)
LRR 12 362..383 4/15 (27%)
leucine-rich repeat 363..382 CDD:275380 4/14 (29%)
LRRCT 395..436 CDD:214507
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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