DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42709 and nyx

DIOPT Version :9

Sequence 1:NP_001163434.1 Gene:CG42709 / 39453 FlyBaseID:FBgn0261674 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_001071085.1 Gene:nyx / 568821 ZFINID:ZDB-GENE-061026-3 Length:469 Species:Danio rerio


Alignment Length:314 Identity:76/314 - (24%)
Similarity:131/314 - (41%) Gaps:38/314 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 SCPRNCLCLEDFK-FVQCANAHLTHVPLDMPKTAAIIDLSHNVIAELRPEDFANLSRAVEINLNH 155
            |||..|.|.::.. .|.|.:.::..:|.:.|..|:.|:|..|.:..|....|..|.....::|.:
Zfish    27 SCPPTCTCTQEKSCSVLCDHVNMMDLPKEFPCEASSINLDKNSLKFLSERAFGTLPSLKTLSLKY 91

  Fly   156 NLISSIDKDVFQGSERLKRLRLANNRLTK-IDPDTFAAAKELTLLDLSNNTITQRLDGSFLNQPD 219
            |.||.|....|:|...|..|::|:|...: :...||.|.|.|..||||:..:....|..||.|..
Zfish    92 NNISFITPGAFKGLPNLVELKMAHNEYIRYLHTRTFTALKRLVRLDLSDCNLFNMPDRIFLEQIT 156

  Fly   220 LVEFSCVNCSWTELPEQTFQNMSGLEVLRLNKNDFKQQINTKAFSPLTKIIKLKLPELEQQNI-- 282
            |.|..|...::..:| ...:.|..|..:.|.:|    :|...|::.|..:..||...|::..|  
Zfish   157 LKELLCFQNNFRRVP-GALRGMENLTHVYLERN----KIEAVAYNSLLGLTSLKYLNLQENRINV 216

  Fly   283 --EELCSLLTSIDTISFLNYDISCYEFVLGTPFNGSLIYPTEPPLKGITNPPIV----ASITSTA 341
              :|....|..::.. :||.::              |:...:...||::|..::    ..:|:.:
Zfish   217 IHDEAFKDLIRLENF-YLNDNL--------------LVDLPQQAFKGLSNLKMLNLGGNLLTNVS 266

  Fly   342 KP--VTATPAPPRSANRNR------GKMDNSTELVKAGILSSETSTSGVSVEPP 387
            |.  ...........:|||      |..:|.|.|:...:.|:..::...||..|
Zfish   267 KTWFSDLVELEVLYLDRNRLSYIEDGSFENLTSLITLHLNSNNLTSLPFSVFQP 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42709NP_001163434.1 LRR_8 126..182 CDD:290566 17/55 (31%)
leucine-rich repeat 128..147 CDD:275380 5/18 (28%)
leucine-rich repeat 148..171 CDD:275380 7/22 (32%)
LRR_RI <150..225 CDD:238064 26/75 (35%)
LRR_8 171..254 CDD:290566 25/83 (30%)
leucine-rich repeat 172..195 CDD:275380 7/23 (30%)
leucine-rich repeat 196..219 CDD:275380 9/22 (41%)
leucine-rich repeat 220..243 CDD:275380 5/22 (23%)
leucine-rich repeat 244..268 CDD:275380 6/23 (26%)
nyxNP_001071085.1 leucine-rich repeat 64..83 CDD:275380 5/18 (28%)
LRR_8 82..143 CDD:290566 20/60 (33%)
leucine-rich repeat 84..107 CDD:275380 7/22 (32%)
leucine-rich repeat 108..132 CDD:275380 7/23 (30%)
LRR_RI <127..311 CDD:238064 45/203 (22%)
leucine-rich repeat 133..179 CDD:275380 14/46 (30%)
LRR_8 179..238 CDD:290566 14/77 (18%)
leucine-rich repeat 180..203 CDD:275380 6/26 (23%)
leucine-rich repeat 204..227 CDD:275380 6/22 (27%)
LRR_8 227..286 CDD:290566 10/73 (14%)
leucine-rich repeat 228..251 CDD:275380 5/37 (14%)
leucine-rich repeat 252..275 CDD:275380 2/22 (9%)
LRR_8 275..333 CDD:290566 11/46 (24%)
leucine-rich repeat 276..299 CDD:275380 5/22 (23%)
leucine-rich repeat 300..319 CDD:275380 4/18 (22%)
LRRCT 332..>366 CDD:214507
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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