DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42709 and CG4950

DIOPT Version :10

Sequence 1:NP_648600.1 Gene:CG42709 / 39453 FlyBaseID:FBgn0261674 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_648855.2 Gene:CG4950 / 39783 FlyBaseID:FBgn0036587 Length:574 Species:Drosophila melanogaster


Alignment Length:366 Identity:81/366 - (22%)
Similarity:144/366 - (39%) Gaps:75/366 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 TAAIIDLSHNVIAELRPEDFANLSRAVEINLNHNLISSIDKDVFQGSERLKRLRLANNRLTKIDP 187
            |.:.|.|:.|::.||..:.|.:.....:::...||::||..:||:...|:|.:.|:||||..|.|
  Fly   167 TISQIYLTGNLLKELHNDIFKDNEYLEKVSFEGNLLTSIQPEVFRNMRRIKEVNLSNNRLIFIHP 231

  Fly   188 DTFAAAKELTLL-----DLSNNTITQR-------LDGSFLNQPDLVEFSCVNCSWTELPEQTFQN 240
            ||||.|..|..|     :|.|..:|::       ||.::|....:.....|..|..::.|.....
  Fly   232 DTFADAASLENLVLSYNELKNFQLTEKNIVHQLHLDNNYLTNLTINATRFVRASHNQISELFLHQ 296

  Fly   241 MSGLEVLRLNKNDFKQ---------------------QINTKAFSPLTKIIKLKL-----PEL-- 277
            ...:|.|.|:.|....                     .:|...||.|.::..|.|     .||  
  Fly   297 SLHIETLDLSANKLSSISNITNITHMLYLDVSDNPIGPLNISTFSQLKRLRGLNLRGTGIRELKF 361

  Fly   278 ----EQQNIEEL---CSLLTSIDTISFLNYDISCYEFVLG----TPFNGSLIYPTE-PPLK--GI 328
                :|:.:|||   .:.||.::...|:.|..:..:|::.    |...|:..:... |.|:  |:
  Fly   362 GMFSKQKYLEELDLSFNNLTILNLDMFVPYLTNLKKFLIDGNGLTELQGNRTFSEAFPQLQKLGV 426

  Fly   329 TN--------------PPIVASITSTAKPVTATPAPPRSANRNRGKMDNSTELVKAGILSSETST 379
            :.              |.:..|:....:|.|.....|..  |:...:..|.|:|.|...:.|:  
  Fly   427 SRNRFNCSYLHHLLIPPSLPESVVLNIEPDTNLDETPHI--RDVSCISQSQEVVNASFTAEES-- 487

  Fly   380 SGVSVEPPAESQTNQVQISQEAINTLLICIMVLAVIGIVIG 420
               .:|...:..:.|:.|.......|.:.:..:.:...|:|
  Fly   488 ---KLESQIQMLSKQLDIVGSHSKNLELHLAFMQIFAYVMG 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42709NP_648600.1 LRR <127..>300 CDD:443914 56/219 (26%)
leucine-rich repeat 128..147 CDD:275380 5/18 (28%)
leucine-rich repeat 148..171 CDD:275380 6/22 (27%)
leucine-rich repeat 172..195 CDD:275380 13/22 (59%)
leucine-rich repeat 196..219 CDD:275380 8/34 (24%)
leucine-rich repeat 220..243 CDD:275380 3/22 (14%)
leucine-rich repeat 244..268 CDD:275380 8/44 (18%)
CG4950NP_648855.2 LRR 96..411 CDD:443914 60/243 (25%)
leucine-rich repeat 96..119 CDD:275380
leucine-rich repeat 120..143 CDD:275380
leucine-rich repeat 144..167 CDD:275380 81/366 (22%)
leucine-rich repeat 168..191 CDD:275380 6/22 (27%)
leucine-rich repeat 192..215 CDD:275380 6/22 (27%)
leucine-rich repeat 216..239 CDD:275380 13/22 (59%)
leucine-rich repeat 240..299 CDD:275380 11/58 (19%)
leucine-rich repeat 300..321 CDD:275380 4/20 (20%)
leucine-rich repeat 322..345 CDD:275380 4/22 (18%)
leucine-rich repeat 346..365 CDD:275380 4/18 (22%)
leucine-rich repeat 370..394 CDD:275380 7/23 (30%)
leucine-rich repeat 395..420 CDD:275380 3/24 (13%)
Blue background indicates that the domain is not in the aligned region.

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